RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 EIF4HQ15056 248 aaKnown RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 CEP68Q76N32 757 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 TMPRSS11BQ86T26 416 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 MOSPD2Q8NHP6 518 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 SMOQ99835 787 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 BEX1Q9HBH7 125 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 ZNF451Q9Y4E5 1061 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 PCDHGB2Q9Y5G2 931 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 KANTRA0A1W2PQU2 76 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 DAPL1A0PJW8 107 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 TPST2O60704 377 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 EIF2DP41214 584 aaKnown RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 DPP6P42658 865 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 SLC11A1P49279 550 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 SMSP52788 366 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 CDKN2DP55273 166 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 PSMA6P60900 246 aaKnown RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 ADARB1P78563 741 aaKnown RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 FADDQ13158 208 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 B3GNT8Q7Z7M8 397 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 ZNF598Q86UK7 904 aaKnown RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 GHDCQ8N2G8 530 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 CELF2-AS1Q8N7Q2 184 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 PTERQ96BW5 349 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 FAM129BQ96TA1 746 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 MTERF1Q99551 399 aaKnown RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 SLC2A11Q9BYW1 496 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 SLC32A1Q9H598 525 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 PDLIM7Q9NR12 457 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 UPB1Q9UBR1 384 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 A0A1W2PQ09 198 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 SH3D21A4FU49 640 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 FAM72CH0Y354 149 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 TRIM3O75382 744 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 CPNE6O95741 557 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 PLATP00750 562 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 PKLRP30613 574 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 SNTA1Q13424 505 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 ZNF234Q14588 700 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 ESCO2Q56NI9 601 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 FAM72AQ5TYM5 149 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 TXNDC8Q6A555 127 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 FAM72DQ6L9T8 149 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 KIAA1161Q6NSJ0 714 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 FBXL22Q6P050 247 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 CLEC14AQ86T13 490 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 PARGQ86W56 976 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 TMEM17Q86X19 198 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 FAM72BQ86X60 149 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 LSMEM2Q8N112 164 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 FAM83FQ8NEG4 500 aaPredicted RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 OR10H4Q8NGA5 316 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 OR6C4Q8NGE1 309 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 HERVK_113Q902F9 699 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 CCDC115Q96NT0 180 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 FEVQ99581 238 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 PSD2Q9BQI7 771 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 SLC35A5Q9BS91 424 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 GORASP2Q9H8Y8 452 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 GMPR2Q9P2T1 348 aaKnown RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 OR10H1Q9Y4A9 318 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 IGKV6-21A0A0C4DH24 114 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 AXIN1O15169 862 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 SOX14O95416 240 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 C8GP07360 202 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 GSTM3P21266 225 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 SSR2P43308 183 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 SF1Q15637 639 aaKnown RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 INAVAQ3KP66 663 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 ATP13A5Q4VNC0 1218 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 MEDAGQ5VYS4 303 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 FRG2Q64ET8 278 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 MED27Q6P2C8 311 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 HSDL2Q6YN16 418 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 ZNF534Q76KX8 674 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 CHCHD4Q8N4Q1 142 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 RPLP0P6Q8NHW5 317 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 FRG2BQ96QU4 278 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 DOHHQ9BU89 302 aa10.85□□□□□ -0.67
TCOF1-211ENST00000513346 NSUN3Q9H649 340 aaKnown RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 NDRG2Q9UN36 371 aaKnown RBP10.85□□□□□ -0.67
TCOF1-211ENST00000513346 CROCCQ5TZA2 2017 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 TRBV23OR9-2A0A075B6M9 112 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 CTDSP2O14595 271 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 TOXO94900 526 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 SERPINA3P01011 423 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 GJA1P17302 382 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 GDF5P43026 501 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 MAGEA3P43357 314 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 ADPRMQ3LIE5 342 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 PEG10Q86TG7 708 aaKnown RBP10.84□□□□□ -0.67
TCOF1-211ENST00000513346 KRTCAP2Q8N6L1 136 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 YIPF7Q8N8F6 280 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 C3orf30Q96M34 536 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 RAD9AQ99638 391 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 MGAT4BQ9UQ53 548 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 TTC24A2A3L6 582 aaPredicted RBP10.84□□□□□ -0.67
TCOF1-211ENST00000513346 HMX2A2RU54 273 aa10.84□□□□□ -0.67
TCOF1-211ENST00000513346 PIRO00625 290 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms