RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 TRAPPC4Q9Y296 219 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PPIL1Q9Y3C6 166 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PCDHB14Q9Y5E9 798 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CPQQ9Y646 472 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HS3ST3A1Q9Y663 406 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 LRP1Q07954 4544 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 A0A1B0GTQ1 180 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 IRGMA1A4Y4 181 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HACD1B0YJ81 288 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF879B4DU55 563 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MASP2O00187 686 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ETV2O00321 342 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PRICKLE3O43900 615 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MFSD11O43934 449 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ENTPD6O75354 484 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CRTAMO95727 393 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 LRG1P02750 347 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CSTBP04080 98 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 BPGMP07738 259 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HOXD4P09016 255 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MSH3P20585 1137 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FGFR4P22455 802 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ME2P23368 584 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TARSP26639 723 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 OPRM1P35372 400 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAUP35544 74 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CD79BP40259 229 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PMELP40967 661 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF41P51814 821 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RNASE9P60153 205 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPS15P62841 145 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 GTF2IP78347 998 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF45Q02386 682 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RBPJQ06330 500 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZFP36L1Q07352 338 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SCRN3Q0VDG4 424 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 DRAP1Q14919 205 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM44Q2T9K0 475 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 C15orf59Q2T9L4 293 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF667Q5HYK9 610 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TOR1AIP1Q5JTV8 583 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PAGE3Q5JUK9 113 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 LRCH2Q5VUJ6 765 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 LIPKQ5VXJ0 399 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ACSM2BQ68CK6 577 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 LCN8Q6JVE9 175 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CAPN13Q6MZZ7 669 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZYG11AQ6WRX3 759 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZBTB49Q6ZSB9 765 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CREB3L2Q70SY1 520 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 STRADAQ7RTN6 431 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC16A9Q7RTY1 509 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 C11orf96Q7Z7L8 435 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ITIH5Q86UX2 942 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM35AQ86V20 835 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 BPHLQ86WA6 291 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MUC15Q8N387 334 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MYCT1Q8N699 235 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RNF148Q8N7C7 305 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 KLHL23Q8NBE8 558 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM35BQ8NCS4 154 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PIK3C3Q8NEB9 887 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 C7orf57Q8NEG2 295 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ADAM32Q8TC27 787 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 NAT14Q8WUY8 206 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 EEF1AKMT1Q8WVE0 214 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ADAMTS14Q8WXS8 1223 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 UBE2E3Q969T4 207 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM162AQ96A26 154 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ECHDC3Q96DC8 303 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CCDC85AQ96PX6 553 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 UBL7Q96S82 380 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM213AQ9BRX8 229 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PHF7Q9BWX1 381 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SH3BGRL3Q9H299 93 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 GHITMQ9H3K2 345 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RNPEPQ9H4A4 650 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RETREG1Q9H6L5 497 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SMYD3Q9H7B4 428 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RNF121Q9H920 327 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PLEKHA2Q9HB19 425 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 JPH1Q9HDC5 661 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLAMF7Q9NQ25 335 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RAB6BQ9NRW1 208 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM100Q9NV29 134 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 DZANK1Q9NVP4 752 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SDHAF2Q9NX18 166 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HACD3Q9P035 362 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TBC1D7Q9P0N9 293 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 KLHL8Q9P2G9 620 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FTSJ1Q9UET6 329 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PLEKHB1Q9UF11 243 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CIDEBQ9UHD4 219 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZDHHC2Q9UIJ5 367 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FEM1BQ9UK73 627 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MAGED2Q9UNF1 606 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MSRB2Q9Y3D2 182 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PCDHGA10Q9Y5H3 936 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 IGKV1-8A0A0C4DH67 115 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HELTA6NFD8 242 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms