RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 KNSTRNQ9Y448 316 aa2.73□□□□□ -1.97
CHD1-207ENST00000511628 NEDD4P46934 1319 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 RPGRIP1LQ68CZ1 1315 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 A0A087WZ39 114 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 CCDC162PA2VCL2 907 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 GTPBP10A4D1E9 387 aaKnown RBP2.72□□□□□ -1.97
CHD1-207ENST00000511628 A8MVM7 634 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 MAGEB2O15479 319 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 CYTIPO60759 359 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 LRCH4O75427 683 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 RAD51DO75771 328 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 KRT33AO76009 404 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 BAG2O95816 211 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 CLDN1O95832 211 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 PNPP00491 289 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 CALCAP01258 141 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 VTNP04004 478 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 THEGLP0DJG4 465 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 P4HA1P13674 534 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 HLA-DPA1P20036 260 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 ELAVL4P26378 380 aaKnown RBP2.72□□□□□ -1.97
CHD1-207ENST00000511628 OPRL1P41146 370 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 TEFQ10587 303 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 CBX3Q13185 183 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 CDH18Q13634 790 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 FUT11Q495W5 492 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 LRRC37A5PQ49AS3 106 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 ARMCX4Q5H9R4 360 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 DOK6Q6PKX4 331 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 C17orf107Q6ZR85 190 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 Q6ZRP5 223 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 FCRLAQ7L513 359 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 TMEM126BQ8IUX1 230 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 PEX5LQ8IYB4 626 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 TCEANCQ8N8B7 351 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 OR10G8Q8NGN5 311 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 FAM222BQ8WU58 562 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 GGHQ92820 318 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 PRAM1Q96QH2 718 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 RBM4BQ9BQ04 359 aaKnown RBP2.72□□□□□ -1.97
CHD1-207ENST00000511628 DDX50Q9BQ39 737 aaKnown RBP2.72□□□□□ -1.97
CHD1-207ENST00000511628 NTMT1Q9BV86 223 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 DPEP2Q9H4A9 486 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 AKIRIN1Q9H9L7 192 aaPredicted RBP2.72□□□□□ -1.97
CHD1-207ENST00000511628 RPF1Q9H9Y2 349 aaKnown RBP2.72□□□□□ -1.97
CHD1-207ENST00000511628 PDRG1Q9NUG6 133 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 SLC12A6Q9UHW9 1150 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 APPL1Q9UKG1 709 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 ELF5Q9UKW6 265 aaPredicted RBP2.72□□□□□ -1.97
CHD1-207ENST00000511628 SATB2Q9UPW6 733 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 ITM2BQ9Y287 266 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 ZNF510Q9Y2H8 683 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 WDR37Q9Y2I8 494 aa2.72□□□□□ -1.97
CHD1-207ENST00000511628 SERINC4A6NH21 518 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 BCAS2O75934 225 aaPredicted RBP2.71□□□□□ -1.98
CHD1-207ENST00000511628 LETM1O95202 739 aaPredicted RBP2.71□□□□□ -1.98
CHD1-207ENST00000511628 STBD1O95210 358 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 CXCL14O95715 111 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 CHRNGP07510 517 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 ODC1P11926 461 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 B4GALT1P15291 398 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 SELEP16581 610 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 ATP6V1E1P36543 226 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 CLCN4P51793 760 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 MS4A2Q01362 244 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 SLC34A1Q06495 639 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 PDE7AQ13946 482 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 GK2Q14410 553 aaPredicted RBP2.71□□□□□ -1.98
CHD1-207ENST00000511628 ACKR1Q16570 336 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 HLA-BQ31612 363 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 FASTKD1Q53R41 847 aaKnown RBP2.71□□□□□ -1.98
CHD1-207ENST00000511628 RAB12Q6IQ22 244 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 TATDN1Q6P1N9 297 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 C1orf186Q6ZWK4 172 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 TRMT11Q7Z4G4 463 aaKnown RBP2.71□□□□□ -1.98
CHD1-207ENST00000511628 LRRTM1Q86UE6 522 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 ZNF410Q86VK4 478 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 HOGA1Q86XE5 327 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 CATSPERDQ86XM0 798 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 SPAG16Q8N0X2 631 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 CHCHD4Q8N4Q1 142 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 TEX26Q8N6G2 289 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 ZNRF4Q8WWF5 429 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 SEPT8Q92599 483 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 SLC35C1Q96A29 364 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 BPIFA2Q96DR5 249 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 TMEM237Q96Q45 408 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 NKX3-1Q99801 234 aaPredicted RBP2.71□□□□□ -1.98
CHD1-207ENST00000511628 FUCA2Q9BTY2 467 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 FAM49AQ9H0Q0 323 aaPredicted RBP2.71□□□□□ -1.98
CHD1-207ENST00000511628 UPF3AQ9H1J1 476 aaKnown RBP2.71□□□□□ -1.98
CHD1-207ENST00000511628 THAP9Q9H5L6 903 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 MAGEF1Q9HAY2 307 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 POLKQ9UBT6 870 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 EXOC6BQ9Y2D4 811 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 ZHX2Q9Y6X8 837 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 MYH15Q9Y2K3 1946 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 GPRASP1Q5JY77 1395 aa2.71□□□□□ -1.98
CHD1-207ENST00000511628 TMEM129A0AVI4 362 aa2.7□□□□□ -1.98
CHD1-207ENST00000511628 SLC15A5A6NIM6 579 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms