RNA–Protein interactions for RNA: ENST00000509587.1

MBD4-207, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-207ENST00000509587 ARFIP1P53367 373 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 PLA2G16P53816 162 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 FOXA1P55317 472 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 CXADRP78310 365 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 TGM3Q08188 693 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 IFT88Q13099 833 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 CUL3Q13618 768 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 ERV3-1Q14264 604 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 UGT8Q16880 541 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 TTC19Q6DKK2 380 aaPredicted RBP16.5■□□□□ 0.23
MBD4-207ENST00000509587 TRIM40Q6P9F5 258 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 ZC3H7AQ8IWR0 971 aaKnown RBP16.5■□□□□ 0.23
MBD4-207ENST00000509587 METTL6Q8TCB7 284 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 ADAMTS17Q8TE56 1095 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 MIEF2Q96C03 454 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 MTFMTQ96DP5 389 aaKnown RBP16.5■□□□□ 0.23
MBD4-207ENST00000509587 ATP6V1G3Q96LB4 118 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 KCNC2Q96PR1 638 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 TBCDQ9BTW9 1192 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 TNFRSF12AQ9NP84 129 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 HCN3Q9P1Z3 774 aa16.5■□□□□ 0.23
MBD4-207ENST00000509587 CHST10O43529 356 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 SH3BGRLO75368 114 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 SCELO95171 688 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 BMP10O95393 424 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 PDYNP01213 254 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 KRT6AP02538 564 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 KRT6BP04259 564 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 IL10P22301 178 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 ARRB2P32121 409 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 FOLR3P41439 243 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 KRT6CP48668 564 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 WDR4P57081 412 aaKnown RBP16.49■□□□□ 0.23
MBD4-207ENST00000509587 OLR1P78380 273 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 KLC1Q07866 573 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 GALNT1Q10472 559 aaPredicted RBP16.49■□□□□ 0.23
MBD4-207ENST00000509587 CDC20Q12834 499 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 SSPNQ14714 243 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 COL28A1Q2UY09 1125 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 TTMPQ5BVD1 217 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 TCHHL1Q5QJ38 904 aaPredicted RBP16.49■□□□□ 0.23
MBD4-207ENST00000509587 ATP1A1-AS1Q5TC04 95 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 ZCCHC23Q6ZST2 131 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 MED25Q71SY5 747 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 LAPTM4BQ86VI4 370 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 NUDCD3Q8IVD9 361 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 SREK1Q8WXA9 508 aaKnown RBP16.49■□□□□ 0.23
MBD4-207ENST00000509587 FAR2Q96K12 515 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 KCNA7Q96RP8 456 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 SERINC2Q96SA4 455 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 SERPINI1Q99574 410 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 YIPF2Q9BWQ6 316 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 NPLQ9BXD5 320 aaPredicted RBP16.49■□□□□ 0.23
MBD4-207ENST00000509587 SOX17Q9H6I2 414 aaPredicted RBP16.49■□□□□ 0.23
MBD4-207ENST00000509587 C14orf105Q9NVL8 296 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 TIMM22Q9Y584 194 aa16.49■□□□□ 0.23
MBD4-207ENST00000509587 A0A088AWK7 358 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 SAP18O00422 153 aaKnown RBP16.48■□□□□ 0.23
MBD4-207ENST00000509587 RTCAO00442 366 aaKnown RBP16.48■□□□□ 0.23
MBD4-207ENST00000509587 PLPP1O14494 284 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 ULK1O75385 1050 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 CHRNGP07510 517 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 PRKAR1AP10644 381 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 ZNF10P21506 573 aaPredicted RBP16.48■□□□□ 0.23
MBD4-207ENST00000509587 ATP5A1P25705 553 aaKnown RBP16.48■□□□□ 0.23
MBD4-207ENST00000509587 SERPINB5P36952 375 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 TSFMP43897 325 aaKnown RBP16.48■□□□□ 0.23
MBD4-207ENST00000509587 XCR1P46094 333 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 MTTPP55157 894 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 ZNF33BQ06732 778 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 RUNX2Q13950 521 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 SGO1Q5FBB7 561 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 ARL13AQ5H913 290 aaPredicted RBP16.48■□□□□ 0.23
MBD4-207ENST00000509587 CES4AQ5XG92 561 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 ZNF793Q6ZN11 406 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 ATG14Q6ZNE5 492 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 SHISA6Q6ZSJ9 500 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 CUZD1Q86UP6 607 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 CA13Q8N1Q1 262 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 SELENOMQ8WWX9 145 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 RGMAQ96B86 450 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 NACC2Q96BF6 587 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 OR1F2PQ96R84 312 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 CENPKQ9BS16 269 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 ZNF717Q9BY31 904 aaPredicted RBP16.48■□□□□ 0.23
MBD4-207ENST00000509587 SHCBP1LQ9BZQ2 653 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 ROGDIQ9GZN7 287 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 BRF2Q9HAW0 419 aa16.48■□□□□ 0.23
MBD4-207ENST00000509587 WDR91A4D1P6 747 aa16.47■□□□□ 0.23
MBD4-207ENST00000509587 CDC14CA4D256 554 aa16.47■□□□□ 0.23
MBD4-207ENST00000509587 B3GALT2O43825 422 aa16.47■□□□□ 0.23
MBD4-207ENST00000509587 JRKO75564 520 aa16.47■□□□□ 0.23
MBD4-207ENST00000509587 SEMA3DO95025 777 aa16.47■□□□□ 0.23
MBD4-207ENST00000509587 HSD3B1P14060 373 aa16.47■□□□□ 0.23
MBD4-207ENST00000509587 HIST1H1TP22492 207 aaPredicted RBP16.47■□□□□ 0.23
MBD4-207ENST00000509587 MMP11P24347 488 aa16.47■□□□□ 0.23
MBD4-207ENST00000509587 HSD3B2P26439 372 aa16.47■□□□□ 0.23
MBD4-207ENST00000509587 CERS1P27544 350 aa16.47■□□□□ 0.23
MBD4-207ENST00000509587 HMOX2P30519 316 aa16.47■□□□□ 0.23
MBD4-207ENST00000509587 HTR6P50406 440 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms