RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 A0A0G2JN53 185 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 TCRBV16S1A1N1A0A5B0 115 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 ASPDHA6ND91 283 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 ANKDD1BA6NHY2 528 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 CDK2AP1O14519 115 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 ASNA1O43681 348 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 PRF1P14222 555 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 ABOP16442 354 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 XKRXQ6PP77 449 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 TMIGD1Q6UXZ0 262 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 SLCO4C1Q6ZQN7 724 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 SPATA6LQ8N4H0 392 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 BBOF1Q8ND07 529 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 RHBDF1Q96CC6 855 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 FRMD6Q96NE9 622 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 CAPS2Q9BXY5 557 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 RHOJQ9H4E5 214 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 CHST11Q9NPF2 352 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 WWOXQ9NZC7 414 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 TXNDC16Q9P2K2 825 aa14.4□□□□□ -0.1
TPM3-219ENST00000509409 MTO1Q9Y2Z2 717 aaKnown RBP14.4□□□□□ -0.1
TPM3-219ENST00000509409 A0A088AWK7 358 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 TRBV11-1A0A0K0K1C0 115 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 CLDN4O14493 209 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 CLGNO14967 610 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 ERI3O43414 337 aaKnown RBP14.39□□□□□ -0.11
TPM3-219ENST00000509409 PIAS1O75925 651 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 MYO1DO94832 1006 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 SNRPB2P08579 225 aaKnown RBP14.39□□□□□ -0.11
TPM3-219ENST00000509409 ZNF10P21506 573 aaPredicted RBP14.39□□□□□ -0.11
TPM3-219ENST00000509409 RPL21P46778 160 aaKnown RBP14.39□□□□□ -0.11
TPM3-219ENST00000509409 HLCSP50747 726 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 CLCN2P51788 898 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 MRPS25P82663 173 aaKnown RBP14.39□□□□□ -0.11
TPM3-219ENST00000509409 POU4F1Q01851 419 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 ILF2Q12905 390 aaKnown RBP14.39□□□□□ -0.11
TPM3-219ENST00000509409 RUNX2Q13950 521 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 BNC2Q6ZN30 1099 aaPredicted RBP14.39□□□□□ -0.11
TPM3-219ENST00000509409 GPSM1Q86YR5 675 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.39□□□□□ -0.11
TPM3-219ENST00000509409 KLHDC8AQ8IYD2 350 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 GHDCQ8N2G8 530 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 TMEM156Q8N614 296 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 SNX31Q8N9S9 440 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 NFAM1Q8NET5 270 aaPredicted RBP14.39□□□□□ -0.11
TPM3-219ENST00000509409 CDKL2Q92772 493 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 GAL3ST3Q96A11 431 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 TSPAN17Q96FV3 270 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 POPDC3Q9HBV1 291 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 SAYSD1Q9NPB0 183 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 PRTFDC1Q9NRG1 225 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 RNF14Q9UBS8 474 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 MMACHCQ9Y4U1 282 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 MYO9AB2RTY4 2548 aa14.39□□□□□ -0.11
TPM3-219ENST00000509409 IGKV3D-11A0A0A0MRZ8 115 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 LRIT2A6NDA9 550 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 C4orf51C9J302 202 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 E7ESA3 106 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 ZNHIT1O43257 154 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 B3GALT2O43825 422 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 NME2P1O60361 137 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 CCDC166P0CW27 439 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 COX6B1P14854 86 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 ZNF24P17028 368 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 NME2P22392 152 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 HPDP32754 393 aaPredicted RBP14.38□□□□□ -0.11
TPM3-219ENST00000509409 SLC6A12P48065 614 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 PLA2G16P53816 162 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 CALCOCO2Q13137 446 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 SLC13A2Q13183 592 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 TGFBIQ15582 683 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 ZNF630Q2M218 657 aaPredicted RBP14.38□□□□□ -0.11
TPM3-219ENST00000509409 FBXO48Q5FWF7 155 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 TCAIMQ8N3R3 496 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 CPSF7Q8N684 471 aaKnown RBP14.38□□□□□ -0.11
TPM3-219ENST00000509409 B3GNT7Q8NFL0 401 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 ADAMTS18Q8TE60 1221 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 ANP32BQ92688 251 aaKnown RBP14.38□□□□□ -0.11
TPM3-219ENST00000509409 MS4A6EQ96DS6 147 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 PDLIM2Q96JY6 352 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 CCDC77Q9BR77 488 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 NPLQ9BXD5 320 aaPredicted RBP14.38□□□□□ -0.11
TPM3-219ENST00000509409 DERL2Q9GZP9 239 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 REXO4Q9GZR2 422 aaKnown RBP14.38□□□□□ -0.11
TPM3-219ENST00000509409 AICDAQ9GZX7 198 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 DPH5Q9H2P9 285 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 CNOT10Q9H9A5 744 aaKnown RBP14.38□□□□□ -0.11
TPM3-219ENST00000509409 CAB39LQ9H9S4 337 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 SMYD2Q9NRG4 433 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 DNAJC11Q9NVH1 559 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 GPRC5BQ9NZH0 403 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 CD274Q9NZQ7 290 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 MRPS33Q9Y291 106 aaKnown RBP14.38□□□□□ -0.11
TPM3-219ENST00000509409 ZNF835Q9Y2P0 537 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 CPAMD8Q8IZJ3 1885 aa14.38□□□□□ -0.11
TPM3-219ENST00000509409 KLRC4-KLRK1H3BQV0 150 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 TP73O15350 636 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 STK16O75716 305 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 IFNA16P05015 189 aa14.37□□□□□ -0.11
TPM3-219ENST00000509409 SSTR1P30872 391 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms