RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 ALDH18A1P54886 795 aaKnown RBP22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 BTN3A2P78410 334 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 NSDHLQ15738 373 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 PFKFB4Q16877 469 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 FAM153CQ494X1 144 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 SFT2D3Q587I9 215 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 B3GNTL1Q67FW5 361 aaPredicted RBP22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 KLC3Q6P597 504 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 ABHD17CQ6PCB6 329 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 CLEC18BQ6UXF7 455 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 TAOK1Q7L7X3 1001 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 ATCAYQ86WG3 371 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 LAS2Q8IYD9 372 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 EFCAB3Q8N7B9 438 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 CLEC18CQ8NCF0 446 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 GALNT11Q8NCW6 608 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 SNRNP40Q96DI7 357 aaKnown RBP22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 REXO4Q9GZR2 422 aaKnown RBP22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 EPB41L4BQ9H329 900 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 HECTD1Q9ULT8 2610 aa22.02■■□□□ 1.12
CSNK1G3-204ENST00000508708 LRRC14BA6NHZ5 514 aa22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 TRIM49D1C9J1S8 452 aa22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 B4GALT2O60909 372 aa22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 GFAPP14136 432 aa22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 UQCRFS1P47985 274 aa22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 AP2B1P63010 937 aa22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 RUNX2Q13950 521 aa22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 PCBP2Q15366 365 aaKnown RBP eCLIP22.01■■□□□ 1.116e-8■■■■□ 24
CSNK1G3-204ENST00000508708 PAPD4Q6PIY7 484 aaKnown RBP22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 TRMT10CQ7L0Y3 403 aaKnown RBP22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 ZNF473Q8WTR7 871 aaKnown RBP22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 C19orf60Q96EN9 201 aa22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 BARD1Q99728 777 aaKnown RBP22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 NPLQ9BXD5 320 aaPredicted RBP22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 MS4A8Q9BY19 250 aa22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 NTNG1Q9Y2I2 539 aa22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 IKBKGQ9Y6K9 419 aa22.01■■□□□ 1.11
CSNK1G3-204ENST00000508708 EXOC1LA0A1B0GW35 172 aa22■■□□□ 1.11
CSNK1G3-204ENST00000508708 FAM227AF5H4B4 570 aa22■■□□□ 1.11
CSNK1G3-204ENST00000508708 EPB42P16452 691 aa22■■□□□ 1.11
CSNK1G3-204ENST00000508708 PLA2G16P53816 162 aa22■■□□□ 1.11
CSNK1G3-204ENST00000508708 BTG2P78543 158 aa22■■□□□ 1.11
CSNK1G3-204ENST00000508708 BTBD16Q32M84 506 aa22■■□□□ 1.11
CSNK1G3-204ENST00000508708 GRHL2Q6ISB3 625 aa22■■□□□ 1.11
CSNK1G3-204ENST00000508708 TEX9Q8N6V9 391 aa22■■□□□ 1.11
CSNK1G3-204ENST00000508708 MMP25Q9NPA2 562 aa22■■□□□ 1.11
CSNK1G3-204ENST00000508708 XPR1Q9UBH6 696 aa22■■□□□ 1.11
CSNK1G3-204ENST00000508708 CLDN16Q9Y5I7 305 aa22■■□□□ 1.11
CSNK1G3-204ENST00000508708 TCRBV16S1A1N1A0A5B0 115 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 PRMT3O60678 531 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 SIX3O95343 332 aaPredicted RBP21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 MAOAP21397 527 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 CERS1P27544 350 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 HPDP32754 393 aaPredicted RBP21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 TSFMP43897 325 aaKnown RBP21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 SRSF1Q07955 248 aaKnown RBP eCLIP21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 ZNF169Q14929 603 aaPredicted RBP21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 TLR1Q15399 786 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 EXT1Q16394 746 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 H3F3CQ6NXT2 135 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 MED27Q6P2C8 311 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 TRIM40Q6P9F5 258 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 UBE3DQ7Z6J8 389 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 SCUBE1Q8IWY4 988 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 GSPT2Q8IYD1 628 aaKnown RBP21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 CISD2Q8N5K1 135 aaKnown RBP21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 OR7G3Q8NG95 312 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 DNAJB14Q8TBM8 379 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 UBE2E3Q969T4 207 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 FAR2Q96K12 515 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 CNDP1Q96KN2 507 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 F2RL3Q96RI0 385 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 LPAR4Q99677 370 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 RNF32Q9H0A6 362 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 NECTIN3Q9NQS3 549 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 PRDM9Q9NQV7 894 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 ASF1BQ9NVP2 202 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 CPSF2Q9P2I0 782 aaKnown RBP21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 DOPEY2Q9Y3R5 2298 aa21.99■■□□□ 1.11
CSNK1G3-204ENST00000508708 HIVEP3Q5T1R4 2406 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 PSMD12O00232 456 aaPredicted RBP21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 E2F3O00716 465 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 B3GALT2O43825 422 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 MYBL2P10244 700 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 COL6A2P12110 1019 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 HNRNPFP52597 415 aaKnown RBP21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 RAB38P57729 211 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 OR4D2P58180 307 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 SLC26A5P58743 744 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 HIST2H2ACQ16777 129 aaPredicted RBP21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 TSNAXIP1Q2TAA8 658 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 HIST2H2AA3Q6FI13 130 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 METTL2BQ6P1Q9 378 aaKnown RBP21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 ZNF793Q6ZN11 406 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 GOLGA7Q7Z5G4 137 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 PTGR2Q8N8N7 351 aaPredicted RBP21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 TMEM52Q8NDY8 209 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 CATSPER1Q8NEC5 780 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 M1APQ8TC57 530 aa21.98■■□□□ 1.11
CSNK1G3-204ENST00000508708 HAS2Q92819 552 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms