RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 SGSM1Q2NKQ1 1148 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 PHLDA2Q53GA4 152 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 TAF1BQ53T94 588 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 CYP4A22Q5TCH4 519 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 OR6B2Q6IFH4 312 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 FAM166AQ6J272 317 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 TTC27Q6P3X3 843 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 PSRC1Q6PGN9 363 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 ABRAXAS1Q6UWZ7 409 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 BTNL8Q6UX41 500 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 TAF8Q7Z7C8 310 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 TMEM139Q8IV31 216 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 GRHL3Q8TE85 626 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 HSD17B8Q92506 261 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 P2RX5Q93086 422 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 VPS39Q96JC1 886 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 C18orf12Q96KH6 178 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 AGAP3Q96P47 875 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 ZNF300Q96RE9 604 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 HSD3B7Q9H2F3 369 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 RPF1Q9H9Y2 349 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 P4HTMQ9NXG6 502 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 AATFQ9NY61 560 aaKnown RBP eCLIP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 SPHK1Q9NYA1 384 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 NDUFA13Q9P0J0 144 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 LRWD1Q9UFC0 647 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 KCNN3Q9UGI6 736 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 DAPK2Q9UIK4 370 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 TRMT6Q9UJA5 497 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 KCNK6Q9Y257 313 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 NUDCQ9Y266 331 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 NCKAP1Q9Y2A7 1128 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 KIF3AQ9Y496 699 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 TEX264Q9Y6I9 313 aa3.65□□□□□ -1.83
TRAPPC13-209ENST00000508304 ZNF318Q5VUA4 2279 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 TRAV18A0A075B6X5 111 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 A0A1W2PN81 502 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 A0A1W2PPK0 400 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 MAGEB16A2A368 324 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 E9PI62 339 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 F8VVB4 439 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 F8VWA3 439 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 K7EPI3 171 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 KLF11O14901 512 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 SMPD2O60906 423 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 RNASEH1O60930 286 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 HMMRO75330 724 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 BAG3O95817 575 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 EFNA1P20827 205 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 CDH3P22223 829 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 CHRNA7P36544 502 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 MAGEA11P43364 429 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 CAMLGP49069 296 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 HNRNPFP52597 415 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 SRP54P61011 504 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 PDE7AQ13946 482 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 KARSQ15046 597 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 KRT31Q15323 416 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 UGT3A2Q3SY77 523 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 DCAF10Q5QP82 559 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 LYSMD4Q5XG99 296 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 PM20D1Q6GTS8 502 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 RAET1GQ6H3X3 334 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 ZNF774Q6NX45 483 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 PRSS55Q6UWB4 352 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 WDR88Q6ZMY6 472 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 MACC1Q6ZN28 852 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 MMD2Q8IY49 270 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 FBXL16Q8N461 479 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 OR11H4Q8NGC9 324 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 RNASE8Q8TDE3 154 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 FAM46BQ96A09 425 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 ULK4Q96C45 1275 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 TSSK2Q96PF2 358 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 TSGA13Q96PP4 275 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 DDX50Q9BQ39 737 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 RAB17Q9H0T7 212 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 MAGEF1Q9HAY2 307 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 CHST11Q9NPF2 352 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 ASIC3Q9UHC3 531 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 ATP6V0A2Q9Y487 856 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 CSAG2Q9Y5P2 127 aa3.64□□□□□ -1.83
TRAPPC13-209ENST00000508304 A0A0B4J203 849 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 MACROD2A1Z1Q3 448 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 CASTOR2A6NHX0 329 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 E5RGE8 158 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 NPIPA3F8WFD2 350 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 TLR4O00206 839 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 PEX11AO75192 247 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 GRAP2O75791 330 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 OR6B1O95007 311 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 AKR7A3O95154 331 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 TGFAP01135 160 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 PRG2P13727 222 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 CA6P23280 308 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 SHC1P29353 583 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 CHRNA3P32297 505 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 CSTF2P33240 577 aaKnown RBP eCLIP3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 HSPA1LP34931 641 aa3.63□□□□□ -1.83
TRAPPC13-209ENST00000508304 VAMP7P51809 220 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms