RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 UBAP2Q5T6F2 1119 aaKnown RBP13.39□□□□□ -0.27
RAB28-205ENST00000508274 SULT1C3Q6IMI6 304 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 TUBA3EQ6PEY2 450 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 TCAIMQ8N3R3 496 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 SNX31Q8N9S9 440 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 SUN3Q8TAQ9 357 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 GAL3ST3Q96A11 431 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 KIAA1191Q96A73 305 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 ALG9Q9H6U8 611 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 GPRC5BQ9NZH0 403 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 CD274Q9NZQ7 290 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 COPG2Q9UBF2 871 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 PTBP2Q9UKA9 531 aaKnown RBP13.39□□□□□ -0.27
RAB28-205ENST00000508274 RNF112Q9ULX5 631 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 MYO7BQ6PIF6 2116 aa13.39□□□□□ -0.27
RAB28-205ENST00000508274 TEX15Q9BXT5 2789 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 TCRBV16S1A1N1A0A5B0 115 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 LRIT2A6NDA9 550 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 GABRR3A8MPY1 467 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 A8MUA0 341 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 PSMD12O00232 456 aaPredicted RBP13.38□□□□□ -0.27
RAB28-205ENST00000508274 H2AFYO75367 372 aaKnown RBP13.38□□□□□ -0.27
RAB28-205ENST00000508274 STK16O75716 305 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 EPORP19235 508 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 STX2P32856 288 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 SPRP35270 261 aaPredicted RBP13.38□□□□□ -0.27
RAB28-205ENST00000508274 CD96P40200 585 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 STXBP1P61764 594 aaKnown RBP13.38□□□□□ -0.27
RAB28-205ENST00000508274 CAV1Q03135 178 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 RUNX2Q13950 521 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 GRTP1Q5TC63 336 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 RAPH1Q70E73 1250 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 MAMDC2Q7Z304 686 aaPredicted RBP13.38□□□□□ -0.27
RAB28-205ENST00000508274 KRT78Q8N1N4 520 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 MDS2Q8NDY4 140 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 TMEM52Q8NDY8 209 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 TTLQ8NG68 377 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 ELP5Q8TE02 316 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 CNOT10Q9H9A5 744 aaKnown RBP13.38□□□□□ -0.27
RAB28-205ENST00000508274 KLHL1Q9NR64 748 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 ABI3Q9P2A4 366 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 ZNF490Q9ULM2 529 aaPredicted RBP13.38□□□□□ -0.27
RAB28-205ENST00000508274 CENPEQ02224 2701 aa13.38□□□□□ -0.27
RAB28-205ENST00000508274 SAGE2PA6NJ88 616 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 TGFBR3LH3BV60 316 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 CCNT2O60583 730 aaKnown RBP13.37□□□□□ -0.27
RAB28-205ENST00000508274 TFEBP19484 476 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 HNRNPFP52597 415 aaKnown RBP13.37□□□□□ -0.27
RAB28-205ENST00000508274 PLA2G16P53816 162 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 DOC2AQ14183 400 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 OR1C1Q15619 314 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 PDK4Q16654 411 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 XKR6Q5GH73 641 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 ZNF468Q5VIY5 522 aaPredicted RBP13.37□□□□□ -0.27
RAB28-205ENST00000508274 C1QL3Q5VWW1 255 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 SPINK14Q6IE38 97 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 ISCA2Q86U28 154 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 FJX1Q86VR8 437 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 SLC5A8Q8N695 610 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 FAM47BQ8NA70 645 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 NFAM1Q8NET5 270 aaPredicted RBP13.37□□□□□ -0.27
RAB28-205ENST00000508274 MRRFQ96E11 262 aaKnown RBP13.37□□□□□ -0.27
RAB28-205ENST00000508274 FAR2Q96K12 515 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 C16orf45Q96MC5 204 aaPredicted RBP13.37□□□□□ -0.27
RAB28-205ENST00000508274 QRFPRQ96P65 431 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 UTP23Q9BRU9 249 aaKnown RBP13.37□□□□□ -0.27
RAB28-205ENST00000508274 LRRC1Q9BTT6 524 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 REXO4Q9GZR2 422 aaKnown RBP13.37□□□□□ -0.27
RAB28-205ENST00000508274 EHD1Q9H4M9 534 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 CDCP1Q9H5V8 836 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 CLK4Q9HAZ1 481 aaKnown RBP13.37□□□□□ -0.27
RAB28-205ENST00000508274 PRDM9Q9NQV7 894 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 ZDHHC18Q9NUE0 388 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 CACNA1DQ01668 2161 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 ANKDD1BA6NHY2 528 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 UBXN8O00124 270 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 CLGNO14967 610 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 CLEC3AO75596 197 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 UNC5CO95185 931 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 STSP08842 583 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 CERS1P27544 350 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 PPP2R1BP30154 601 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 TAS2R50P59544 299 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 GUCY2DQ02846 1103 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 BMPR2Q13873 1038 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 ADPRMQ3LIE5 342 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 CDKL4Q5MAI5 379 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 ZNF787Q6DD87 383 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 C8orf74Q6P047 294 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 GFRALQ6UXV0 394 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 WDR34Q96EX3 536 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 PTCD3Q96EY7 689 aaKnown RBP13.37□□□□□ -0.27
RAB28-205ENST00000508274 ATOH8Q96SQ7 321 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 CSF3RQ99062 836 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 CAPS2Q9BXY5 557 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 NT5DC2Q9H857 520 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 IGSF5Q9NSI5 407 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 CLDN16Q9Y5I7 305 aa13.37□□□□□ -0.27
RAB28-205ENST00000508274 SUPT3HB4E1H0 165 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 ZG16O60844 167 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms