RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 PRAMEF19Q5SWL8 479 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 PLEKHS1Q5SXH7 462 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 PDZK1Q5T2W1 519 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 HECTD3Q5T447 861 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ADGRF1Q5T601 910 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 DDI2Q5TDH0 399 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 LCN1P1Q5VSP4 162 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 SDHAF4Q5VUM1 108 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 LAIR1Q6GTX8 287 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 RETSATQ6NUM9 610 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 METAP1DQ6UB28 335 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 FAM151BQ6UXP7 276 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 PTCHD4Q6ZW05 846 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 MOB2Q70IA6 237 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 UBE2R2Q712K3 238 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF767PQ75MW2 155 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 GPR155Q7Z3F1 870 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 VN1R5Q7Z5H4 357 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 VTCN1Q7Z7D3 282 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 SYT9Q86SS6 491 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 RASAL3Q86YV0 1011 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 PLCZ1Q86YW0 608 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TCTE3Q8IZS6 198 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TAGAPQ8N103 731 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 LGI4Q8N135 537 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CFAP52Q8N1V2 620 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 NXPE1Q8N323 547 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 LINC00471Q8N535 108 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC5A8Q8N695 610 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 NATD1Q8N6N6 113 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CLDN22Q8N7P3 220 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CELF2-AS1Q8N7Q2 184 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 DCAF4L2Q8NA75 395 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 HJURPQ8NCD3 748 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 PSD4Q8NDX1 1056 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 B3GNT7Q8NFL0 401 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR4C15Q8NGM1 316 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 WDR36Q8NI36 951 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ENKURQ8TC29 256 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 UTP15Q8TED0 518 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 SOCS4Q8WXH5 440 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 KLHL6Q8WZ60 621 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CLP1Q92989 425 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 MTFMTQ96DP5 389 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TMEM80Q96HE8 168 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 FRMD6Q96NE9 622 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TEFMQ96QE5 360 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR2A14Q96R47 310 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 COPS8Q99627 209 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 SEPT5Q99719 369 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 BARD1Q99728 777 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TMEM246Q9BRR3 403 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CCM2Q9BSQ5 444 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TTPALQ9BTX7 342 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 MED18Q9BUE0 208 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 BBS2Q9BXC9 721 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ASPNQ9BXN1 380 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 BHLHE41Q9C0J9 482 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 PDGFDQ9GZP0 370 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 RNF38Q9H0F5 515 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR51E2Q9H255 320 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TMEM38AQ9H6F2 299 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 NIPAL2Q9H841 368 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF408Q9H9D4 720 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 EXOSC4Q9NPD3 245 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 RPRD1BQ9NQG5 326 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 RAD18Q9NS91 495 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC6A13Q9NSD5 602 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 MS4A12Q9NXJ0 267 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 FBXL12Q9NXK8 326 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ING3Q9NXR8 418 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 GPR83Q9NYM4 423 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 NDUFAF4Q9P032 175 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 GULP1Q9UBP9 304 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 LHX3Q9UBR4 397 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 EVLQ9UI08 416 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 STOML2Q9UJZ1 356 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 ADAM30Q9UKF2 790 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 HCN2Q9UL51 889 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 TMCC3Q9ULS5 477 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 PPT2Q9UMR5 302 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 RPL36Q9Y3U8 105 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 CMAHPQ9Y471 501 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 PCDHGA2Q9Y5H1 932 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 MRPL42Q9Y6G3 142 aaKnown RBP4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 MAU2Q9Y6X3 613 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 NLRC5Q86WI3 1866 aa4.77□□□□□ -1.65
HMGB3P16-201ENST00000508037 HYKKA2RU49 373 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 MTMR11A4FU01 709 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC38A8A6NNN8 435 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZAR1LA6NP61 321 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF670-ZNF695F2Z2N8 137 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 H0YIV9 168 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 H3BQ06 376 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 MYL12BO14950 172 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 SEC14L5O43304 696 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 SGTAO43765 313 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 SCN2BO60939 215 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 GUCY1B2O75343 617 aa4.76□□□□□ -1.65
HMGB3P16-201ENST00000508037 DDNO94850 711 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms