RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 H0YIV9 168 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 OR7A17O14581 309 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 DPM1O60762 260 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 CDH16O75309 829 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 ALPPP05187 535 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 NUDT17P0C025 328 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 PYGBP11216 843 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 RNH1P13489 461 aaKnown RBP12.78□□□□□ -0.36
PDCD6-204ENST00000506909 TAC1P20366 129 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 ITGA3P26006 1051 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 PIK3CBP42338 1070 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 OLR1P78380 273 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 RHAGQ02094 409 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 TGM3Q08188 693 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 Q0VFX4 171 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 TMEM35AQ53FP2 167 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 MFSD4BQ5TF39 518 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 IGFL3Q6UXB1 125 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 ATG14Q6ZNE5 492 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 SH2D5Q6ZV89 423 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 CHSY3Q70JA7 882 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 CPEB2Q7Z5Q1 589 aaKnown RBP12.78□□□□□ -0.36
PDCD6-204ENST00000506909 PARP9Q8IXQ6 854 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 CA13Q8N1Q1 262 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 TEX19Q8NA77 164 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 CMTM7Q96FZ5 175 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 IMMP1LQ96LU5 166 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 SERINC2Q96SA4 455 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 TUBB6Q9BUF5 446 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 LHPPQ9H008 270 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 ZNF160Q9HCG1 818 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 ZBTB26Q9HCK0 441 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 PRDM7Q9NQW5 492 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 RIC8BQ9NVN3 520 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 PSD3Q9NYI0 1048 aa12.78□□□□□ -0.36
PDCD6-204ENST00000506909 C19orf25Q9UFG5 118 aaPredicted RBP12.78□□□□□ -0.36
PDCD6-204ENST00000506909 OR2W5A6NFC9 320 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 GOLGA8RI6L899 631 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 PSMD12O00232 456 aaPredicted RBP12.77□□□□□ -0.37
PDCD6-204ENST00000506909 B3GALT2O43825 422 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 CLDN9O95484 217 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 RPS17P08708 135 aaKnown RBP12.77□□□□□ -0.37
PDCD6-204ENST00000506909 PCNAP12004 261 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 ICAM2P13598 275 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 PLA2G2AP14555 144 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 KRT15P19012 456 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 CASRP41180 1078 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 SLCO1A2P46721 670 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 CCNG1P51959 295 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 ARFIP1P53367 373 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 PLA2G16P53816 162 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 MTTPP55157 894 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 AP2B1P63010 937 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 EEF1A2Q05639 463 aaKnown RBP12.77□□□□□ -0.37
PDCD6-204ENST00000506909 RAPSNQ13702 412 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 RUNX2Q13950 521 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 PCOLCEQ15113 449 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 ERCC6LQ2NKX8 1250 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 DEPDC1Q5TB30 811 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 IRAK1BP1Q5VVH5 260 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 QSOX2Q6ZRP7 698 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 RIPOR1Q6ZS17 1223 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 MYLK4Q86YV6 388 aaPredicted RBP12.77□□□□□ -0.37
PDCD6-204ENST00000506909 CYP4X1Q8N118 509 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 HUS1BQ8NHY5 278 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 WDR20Q8TBZ3 569 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 EPS8L3Q8TE67 593 aaKnown RBP12.77□□□□□ -0.37
PDCD6-204ENST00000506909 CAVIN3Q969G5 261 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 ATP6V1E2Q96A05 226 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 REPS1Q96D71 796 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 THOC3Q96J01 351 aaKnown RBP12.77□□□□□ -0.37
PDCD6-204ENST00000506909 KCNC2Q96PR1 638 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 F2RL3Q96RI0 385 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 TBCDQ9BTW9 1192 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 ROGDIQ9GZN7 287 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 NOL11Q9H8H0 719 aaKnown RBP12.77□□□□□ -0.37
PDCD6-204ENST00000506909 PPT2Q9UMR5 302 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 RNF11Q9Y3C5 154 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 BSNQ9UPA5 3926 aa12.77□□□□□ -0.37
PDCD6-204ENST00000506909 CROCCQ5TZA2 2017 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 A0A0G2JN53 185 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 SLC28A2O43868 658 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 GLRA3O75311 464 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 CDC123O75794 336 aaPredicted RBP12.76□□□□□ -0.37
PDCD6-204ENST00000506909 TGFB1P01137 390 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 SERPINA7P05543 415 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 PRR35P0CG20 571 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 ATP5F1P24539 256 aaPredicted RBP12.76□□□□□ -0.37
PDCD6-204ENST00000506909 TSFMP43897 325 aaKnown RBP12.76□□□□□ -0.37
PDCD6-204ENST00000506909 RAB38P57729 211 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 HERVK_113P63132 956 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 TRAF3Q13114 568 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 ABRAXAS2Q15018 415 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 NSDHLQ15738 373 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 CPSF6Q16630 551 aaKnown RBP eCLIP12.76□□□□□ -0.37
PDCD6-204ENST00000506909 GGTA1PQ4G0N0 100 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 AGAP7PQ5VUJ5 663 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 KHDRBS2Q5VWX1 349 aaKnown RBP12.76□□□□□ -0.37
PDCD6-204ENST00000506909 IGFL2Q6UWQ7 119 aa12.76□□□□□ -0.37
PDCD6-204ENST00000506909 LANCL3Q6ZV70 420 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms