RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 CDK15Q96Q40 435 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 NPLQ9BXD5 320 aaPredicted RBP18.77■□□□□ 0.6
SNX25-204ENST00000506896 AICDAQ9GZX7 198 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 P4HTMQ9NXG6 502 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 PSD3Q9NYI0 1048 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 HS3ST3B1Q9Y662 390 aa18.77■□□□□ 0.6
SNX25-204ENST00000506896 SCN3AQ9NY46 2000 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 ZNF860A6NHJ4 632 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 IDSB3KWA1 339 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 AGPSO00116 658 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 FOXE1O00358 373 aaPredicted RBP18.76■□□□□ 0.59
SNX25-204ENST00000506896 SUV39H1O43463 412 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 JAK1P23458 1154 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 ARFIP1P53367 373 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 PLA2G16P53816 162 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 CDH13P55290 713 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 DNAJB13P59910 316 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 BTN3A2P78410 334 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 ATP1A4Q13733 1029 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 DDX39BQ13838 428 aaKnown RBP18.76■□□□□ 0.59
SNX25-204ENST00000506896 ZRSR2Q15696 482 aaKnown RBP18.76■□□□□ 0.59
SNX25-204ENST00000506896 CEP85LQ5SZL2 805 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 KHDRBS2Q5VWX1 349 aaKnown RBP18.76■□□□□ 0.59
SNX25-204ENST00000506896 TTC19Q6DKK2 380 aaPredicted RBP18.76■□□□□ 0.59
SNX25-204ENST00000506896 ABHD17CQ6PCB6 329 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 LAPTM4BQ86VI4 370 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 MYRIPQ8NFW9 859 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 OR4F6Q8NGB9 312 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 TBC1D20Q96BZ9 403 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 F2RL3Q96RI0 385 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 SERINC2Q96SA4 455 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 ZNF382Q96SR6 550 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 TBCDQ9BTW9 1192 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 ING2Q9H160 280 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 COPS7BQ9H9Q2 264 aaPredicted RBP18.76■□□□□ 0.59
SNX25-204ENST00000506896 RRAGDQ9NQL2 400 aaPredicted RBP18.76■□□□□ 0.59
SNX25-204ENST00000506896 DMRT3Q9NQL9 472 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 ACSS2Q9NR19 701 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 TRPS1Q9UHF7 1281 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 MKL2Q9ULH7 1088 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 PPT2Q9UMR5 302 aa18.76■□□□□ 0.59
SNX25-204ENST00000506896 ARGFXA6NJG6 315 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 C4orf51C9J302 202 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 H3BQF6 201 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 CHST10O43529 356 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 B3GALT2O43825 422 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 TGFB1P01137 390 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 PTX3P26022 381 aaPredicted RBP18.75■□□□□ 0.59
SNX25-204ENST00000506896 TSFMP43897 325 aaKnown RBP18.75■□□□□ 0.59
SNX25-204ENST00000506896 MTTPP55157 894 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 ASPHQ12797 758 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 LCP2Q13094 533 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 FRG2Q64ET8 278 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 RPS27LQ71UM5 84 aaKnown RBP18.75■□□□□ 0.59
SNX25-204ENST00000506896 OR5T3Q8NGG3 340 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 C9orf43Q8TAL5 461 aaPredicted RBP18.75■□□□□ 0.59
SNX25-204ENST00000506896 WDR20Q8TBZ3 569 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 ADAMTS18Q8TE60 1221 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 TRPC4APQ8TEL6 797 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 PEX11GQ96HA9 241 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 FRG2BQ96QU4 278 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 MTERF1Q99551 399 aaKnown RBP18.75■□□□□ 0.59
SNX25-204ENST00000506896 OXSMQ9NWU1 459 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 SNX6Q9UNH7 406 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 PCSK5Q92824 1860 aa18.75■□□□□ 0.59
SNX25-204ENST00000506896 PSMD12O00232 456 aaPredicted RBP18.74■□□□□ 0.59
SNX25-204ENST00000506896 SOCS6O14544 535 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 CTIFO43310 598 aaKnown RBP18.74■□□□□ 0.59
SNX25-204ENST00000506896 B3GALT4O96024 378 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 FHP07954 510 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 MYZAPP0CAP1 466 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 RNH1P13489 461 aaKnown RBP18.74■□□□□ 0.59
SNX25-204ENST00000506896 ACPPP15309 386 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 PKNOX1P55347 436 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 IFT88Q13099 833 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 CUL3Q13618 768 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 RCN2Q14257 317 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 TUBB8Q3ZCM7 444 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 MINDY4Q4G0A6 757 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 DCAF10Q5QP82 559 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 DEPDC1Q5TB30 811 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 MFSD4BQ5TF39 518 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 LIPMQ5VYY2 423 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 KIRREL2Q6UWL6 708 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 GPRIN3Q6ZVF9 776 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 CCNYL1Q8N7R7 359 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 CLEC1AQ8NC01 280 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 METTL21AQ8WXB1 218 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 RGMAQ96B86 450 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 PGM2Q96G03 612 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 QRFPRQ96P65 431 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 TRIM55Q9BYV6 548 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 VN1R1Q9GZP7 353 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 STMN4Q9H169 189 aaPredicted RBP18.74■□□□□ 0.59
SNX25-204ENST00000506896 ELOVL6Q9H5J4 265 aa18.74■□□□□ 0.59
SNX25-204ENST00000506896 SSU72Q9NP77 194 aaKnown RBP18.74■□□□□ 0.59
SNX25-204ENST00000506896 A0A1W2PQ72 361 aa18.73■□□□□ 0.59
SNX25-204ENST00000506896 MAGEB17A8MXT2 336 aa18.73■□□□□ 0.59
SNX25-204ENST00000506896 MKRN2OSH3BPM6 223 aa18.73■□□□□ 0.59
SNX25-204ENST00000506896 ALOX12BO75342 701 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms