RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 TRAF3Q13114 568 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 CPSF6Q16630 551 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMN1-204ENST00000506163 MFSD4BQ5TF39 518 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 ZNF793Q6ZN11 406 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 NDUFAF7Q7L592 441 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 LCA5Q86VQ0 697 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 MYLK4Q86YV6 388 aaPredicted RBP16.8■□□□□ 0.28
SMN1-204ENST00000506163 CLEC1AQ8NC01 280 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 PLPP5Q8NEB5 264 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 WDR20Q8TBZ3 569 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 ZNF483Q8TF39 744 aaPredicted RBP16.8■□□□□ 0.28
SMN1-204ENST00000506163 OR1F2PQ96R84 312 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 MTERF1Q99551 399 aaKnown RBP16.8■□□□□ 0.28
SMN1-204ENST00000506163 NTMT1Q9BV86 223 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 OR51B5Q9H339 312 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 PPCSQ9HAB8 311 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 SEMA4BQ9NPR2 832 aaPredicted RBP16.8■□□□□ 0.28
SMN1-204ENST00000506163 GPR83Q9NYM4 423 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 TLDC2A0PJX2 215 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 G3V2L1 256 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 H0YIV9 168 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 UGDHO60701 494 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 B4GALT2O60909 372 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 CDH16O75309 829 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 HPP00738 406 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 FHP07954 510 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 GSTA1P08263 222 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 C8orf89P0DMQ9 161 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 AIMP2Q13155 320 aaKnown RBP16.79■□□□□ 0.28
SMN1-204ENST00000506163 MYBPC3Q14896 1274 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 ANKRD37Q7Z713 158 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 TMEM52Q8NDY8 209 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 UBE2E3Q969T4 207 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 IMMP1LQ96LU5 166 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 WDR77Q9BQA1 342 aaPredicted RBP16.79■□□□□ 0.28
SMN1-204ENST00000506163 ZNF700Q9H0M5 742 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 DCDC2Q9UHG0 476 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 TSC22D4Q9Y3Q8 395 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 MAGEB17A8MXT2 336 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 SAP18O00422 153 aaKnown RBP16.79■□□□□ 0.28
SMN1-204ENST00000506163 SUV39H1O43463 412 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 CLDN9O95484 217 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 ETHE1O95571 254 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 PROCP04070 461 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 KRT15P19012 456 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 IL10P22301 178 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 ATP5F1P24539 256 aaPredicted RBP16.79■□□□□ 0.28
SMN1-204ENST00000506163 CERS1P27544 350 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 CD97P48960 835 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 PGDP52209 483 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 HNRNPFP52597 415 aaKnown RBP16.79■□□□□ 0.28
SMN1-204ENST00000506163 SLC18A2Q05940 514 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 DDX39BQ13838 428 aaKnown RBP16.79■□□□□ 0.28
SMN1-204ENST00000506163 ZRSR2Q15696 482 aaKnown RBP16.79■□□□□ 0.28
SMN1-204ENST00000506163 ZNF678Q5SXM1 525 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 DEPDC1Q5TB30 811 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 NIPAL1Q6NVV3 410 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 MREGQ8N565 214 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 PSMF1Q92530 271 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 TMEM237Q96Q45 408 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 SORBS1Q9BX66 1292 aaKnown RBP16.79■□□□□ 0.28
SMN1-204ENST00000506163 CLK4Q9HAZ1 481 aaKnown RBP16.79■□□□□ 0.28
SMN1-204ENST00000506163 DMRT3Q9NQL9 472 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 KCMF1Q9P0J7 381 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 CLDN16Q9Y5I7 305 aa16.79■□□□□ 0.28
SMN1-204ENST00000506163 NSG1A0A0A6YYJ2 146 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 RNH1P13489 461 aaKnown RBP16.78■□□□□ 0.28
SMN1-204ENST00000506163 KRT4P19013 534 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 ITGA3P26006 1051 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 PIK3CBP42338 1070 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 CCNG1P51959 295 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 PRKAA2P54646 552 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 RPS13P62277 151 aaKnown RBP16.78■□□□□ 0.28
SMN1-204ENST00000506163 HERVK_113P63132 956 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 ABRAXAS2Q15018 415 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 KHDRBS2Q5VWX1 349 aaKnown RBP16.78■□□□□ 0.28
SMN1-204ENST00000506163 LETMD1Q6P1Q0 360 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 TRIM40Q6P9F5 258 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 CPEB2Q7Z5Q1 589 aaKnown RBP16.78■□□□□ 0.28
SMN1-204ENST00000506163 C4orf33Q8N1A6 199 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 RBMXL3Q8N7X1 1067 aaKnown RBP16.78■□□□□ 0.28
SMN1-204ENST00000506163 OR4F6Q8NGB9 312 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 TRPC4APQ8TEL6 797 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 ATP6V1E2Q96A05 226 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 MTFMTQ96DP5 389 aaKnown RBP16.78■□□□□ 0.28
SMN1-204ENST00000506163 THOC3Q96J01 351 aaKnown RBP16.78■□□□□ 0.28
SMN1-204ENST00000506163 FAR2Q96K12 515 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 CSF3RQ99062 836 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 ERVK-6Q9BXR3 956 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 NECTIN3Q9NQS3 549 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 PCDHGA11Q9Y5H2 935 aa16.78■□□□□ 0.28
SMN1-204ENST00000506163 IGKV3D-11A0A0A0MRZ8 115 aa16.77■□□□□ 0.27
SMN1-204ENST00000506163 TGFBR3LH3BV60 316 aa16.77■□□□□ 0.27
SMN1-204ENST00000506163 CYR61O00622 381 aa16.77■□□□□ 0.27
SMN1-204ENST00000506163 PLIN3O60664 434 aa16.77■□□□□ 0.27
SMN1-204ENST00000506163 CYC1P08574 325 aa16.77■□□□□ 0.27
SMN1-204ENST00000506163 PRR35P0CG20 571 aa16.77■□□□□ 0.27
SMN1-204ENST00000506163 IMPDH1P20839 514 aa16.77■□□□□ 0.27
SMN1-204ENST00000506163 MAOAP21397 527 aa16.77■□□□□ 0.27
SMN1-204ENST00000506163 ATP5A1P25705 553 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms