RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 HOXD4P09016 255 aaPredicted RBP3.1□□□□□ -1.91
CHD1-203ENST00000505657 SUPT20HL2P0C7V6 817 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 PCP11498 1178 aaKnown RBP3.1□□□□□ -1.91
CHD1-203ENST00000505657 FOLR2P14207 255 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 IL4RP24394 825 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 CCND3P30281 292 aaPredicted RBP3.1□□□□□ -1.91
CHD1-203ENST00000505657 NPBWR1P48145 328 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 RPP38P78345 283 aaKnown RBP3.1□□□□□ -1.91
CHD1-203ENST00000505657 ZFP36L1Q07352 338 aaKnown RBP3.1□□□□□ -1.91
CHD1-203ENST00000505657 SCN1BQ07699 218 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 ITPK1Q13572 414 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 PPA1Q15181 289 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 SPOUT1Q5T280 376 aaKnown RBP3.1□□□□□ -1.91
CHD1-203ENST00000505657 TCEAL6Q6IPX3 200 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 ZNF774Q6NX45 483 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 ZNF841Q6ZN19 808 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 MACC1Q6ZN28 852 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 Q71RC1 249 aaPredicted RBP3.1□□□□□ -1.91
CHD1-203ENST00000505657 PHLDB2Q86SQ0 1253 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 ANKRD46Q86W74 232 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 CARM1Q86X55 608 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 CDC20BQ86Y33 519 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 KLHL7Q8IXQ5 586 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 LYG1Q8N1E2 194 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 KIAA0895Q8NCT3 520 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 SPPL2AQ8TCT8 520 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 ATG101Q9BSB4 218 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 CHCHD5Q9BSY4 110 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 HEXA-AS1Q9H8Q6 139 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 MRPL17Q9NRX2 175 aaKnown RBP3.1□□□□□ -1.91
CHD1-203ENST00000505657 GPR132Q9UNW8 380 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 TMED7Q9Y3B3 224 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 RNF123Q5XPI4 1314 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 HCFC1P51610 2035 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 KBTBD13C9JR72 458 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 K7EQG2 157 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 TRAFD1O14545 582 aaPredicted RBP3.09□□□□□ -1.91
CHD1-203ENST00000505657 IFIT3O14879 490 aaKnown RBP3.09□□□□□ -1.91
CHD1-203ENST00000505657 MTRF1O75570 445 aaKnown RBP3.09□□□□□ -1.91
CHD1-203ENST00000505657 ANGPTL1O95841 491 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 BCL3P20749 454 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 CASTP20810 708 aaKnown RBP3.09□□□□□ -1.91
CHD1-203ENST00000505657 PKLRP30613 574 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 BACE1P56817 501 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 FKBP1BP68106 108 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 FCHO2Q0JRZ9 810 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 CNTN1Q12860 1018 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 BFSP1Q12934 665 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 ABRQ12979 859 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 SCARB2Q14108 478 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 SIX1Q15475 284 aaPredicted RBP3.09□□□□□ -1.91
CHD1-203ENST00000505657 TWISTNBQ3B726 338 aaPredicted RBP3.09□□□□□ -1.91
CHD1-203ENST00000505657 IQCCQ4KMZ1 466 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 ARMCX4Q5H9R4 360 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 SLC27A4Q6P1M0 643 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 CASC4Q6P4E1 433 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 SIGLEC15Q6ZMC9 328 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 CDHR3Q6ZTQ4 885 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 P2RY8Q86VZ1 359 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 AQP12AQ8IXF9 295 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 OR2L2Q8NH16 312 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 SLC35C1Q96A29 364 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 BPIFA2Q96DR5 249 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 CCDC114Q96M63 670 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 PARK7Q99497 189 aaKnown RBP3.09□□□□□ -1.91
CHD1-203ENST00000505657 NACAP1Q9BZK3 213 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 GON4LQ3T8J9 2241 aa3.09□□□□□ -1.91
CHD1-203ENST00000505657 CCDC162PA2VCL2 907 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 WDR46O15213 610 aaKnown RBP3.08□□□□□ -1.92
CHD1-203ENST00000505657 B4GAT1O43505 415 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 SRSF10O75494 262 aaKnown RBP3.08□□□□□ -1.92
CHD1-203ENST00000505657 SLU7O95391 586 aaKnown RBP3.08□□□□□ -1.92
CHD1-203ENST00000505657 CD1DP15813 335 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 GJB2P29033 226 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 SLC1A3P43003 542 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 PGFP49763 221 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 KHKP50053 298 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 LIMK2P53671 638 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 KRTAP10-3P60369 221 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 ERVK-16P61578 105 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 CETN1Q12798 172 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 KNOP1Q1ED39 458 aaKnown RBP3.08□□□□□ -1.92
CHD1-203ENST00000505657 NHSL2Q5HYW2 709 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 MCM10Q7L590 875 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 SLC25A42Q86VD7 318 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 RNF130Q86XS8 419 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 OR4N5Q8IXE1 308 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 PHC2Q8IXK0 858 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 OR8H3Q8N146 312 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 SLC43A2Q8N370 569 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 GOT1L1Q8NHS2 421 aaPredicted RBP3.08□□□□□ -1.92
CHD1-203ENST00000505657 RFT1Q96AA3 541 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 NABP1Q96AH0 204 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 ATF6BQ99941 703 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 MLPHQ9BV36 600 aaPredicted RBP3.08□□□□□ -1.92
CHD1-203ENST00000505657 PUS3Q9BZE2 481 aaKnown RBP3.08□□□□□ -1.92
CHD1-203ENST00000505657 ADNPQ9H2P0 1102 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 PDRG1Q9NUG6 133 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 SLCO1C1Q9NYB5 712 aa3.08□□□□□ -1.92
CHD1-203ENST00000505657 SEPT10Q9P0V9 454 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms