RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 LAMB3Q13751 1172 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 HEPACAMQ14CZ8 416 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CAMK4Q16566 473 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 DUOXA1Q1HG43 343 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ODF4Q2M2E3 257 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 MPPE1Q53F39 396 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 FSCBQ5H9T9 825 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 SPANXN2Q5MJ10 180 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 C20orf194Q5TEA3 1177 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 LYPLAL1Q5VWZ2 237 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 TMEM225Q6GV28 225 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 SNRNP48Q6IEG0 339 aaKnown RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR4A47Q6IF82 309 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 NIPAL3Q6P499 406 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 KCNIP4Q6PIL6 250 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 DOK6Q6PKX4 331 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CBLN3Q6UW01 205 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CWC27Q6UX04 472 aaKnown RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 SLC16A12Q6ZSM3 486 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 AMIGO2Q86SJ2 522 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 OFCC1Q8IZS5 231 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 TRIML2Q8N7C3 387 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 LMNTD1Q8N9Z9 388 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CNBD1Q8NA66 436 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 RNF149Q8NC42 400 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 NPEPL1Q8NDH3 523 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 RDM1Q8NG50 284 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR11H4Q8NGC9 324 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR13J1Q8NGT2 312 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 RAB3IL1Q8TBN0 382 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 Q8TCH9 128 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 SLC38A5Q8WUX1 472 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 OSTF1Q92882 214 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 MAP4K1Q92918 833 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 MCUR1Q96AQ8 359 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 TMEM45BQ96B21 275 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 EFHD2Q96C19 240 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 MRPL53Q96EL3 112 aaKnown RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZNF274Q96GC6 653 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ANKRD27Q96NW4 1050 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 NDNQ99608 321 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 GAL3ST1Q99999 423 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 BPIFA3Q9BQP9 254 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 DCLK3Q9C098 648 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 SDCBP2Q9H190 292 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 SLITRK6Q9H5Y7 841 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZDHHC6Q9H6R6 413 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CALHM2Q9HA72 323 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 SGK2Q9HBY8 427 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 NEK6Q9HC98 313 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 APMAPQ9HDC9 416 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 ACKR4Q9NPB9 350 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 MRPL22Q9NWU5 206 aaKnown RBP3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 SMPD4Q9NXE4 827 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 C1RLQ9NZP8 487 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 KLHL9Q9P2J3 617 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 P2RX2Q9UBL9 471 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 LRWD1Q9UFC0 647 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 DAPK2Q9UIK4 370 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 TINAGQ9UJW2 476 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 CDH9Q9ULB4 789 aa3.39□□□□□ -1.87
HMGB1P22-201ENST00000505315 KANK1Q14678 1352 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 PARD3Q8TEW0 1356 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 CARMIL2Q6F5E8 1435 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 A0A1B0GTQ1 180 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 A0A1W2PN81 502 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 NPIPA2E9PIF3 369 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 PPIAL4DF5H284 164 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 J3KR12 359 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 NDUFS8O00217 210 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 GAPDHSO14556 408 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 KLF11O14901 512 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 TIMM23O14925 209 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 ARPC3O15145 178 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 NUAK1O60285 661 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 JAK2O60674 1132 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 NDUFS7O75251 213 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 TRIM3O75382 744 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 PAPSS2O95340 614 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 WDPCPO95876 746 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 CSTAP01040 98 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 EPOP01588 193 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 SERPINF2P08697 491 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 HKR1P10072 659 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 NEFHP12036 1026 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 CKMT2P17540 419 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 BMP7P18075 431 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 CYP3A5P20815 502 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 PCMT1P22061 227 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 SRD5A2P31213 254 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 NF2P35240 595 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 CHRNA7P36544 502 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 SLC6A8P48029 635 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 VAMP7P51809 220 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 BLOC1S1P78537 153 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 KLC1Q07866 573 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 FUT7Q11130 342 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 EXOSC2Q13868 293 aaKnown RBP3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 SPHARQ15513 63 aa3.38□□□□□ -1.87
HMGB1P22-201ENST00000505315 EFNB3Q15768 340 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms