RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 MTAPQ13126 283 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 CRB2Q5IJ48 1285 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 SIRPB2Q5JXA9 342 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 LETMD1Q6P1Q0 360 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 TMEM135Q86UB9 458 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 RGL4Q8IZJ4 473 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 FAM46DQ8NEK8 389 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 AP3S1Q92572 193 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 COL21A1Q96P44 957 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 TUBA1CQ9BQE3 449 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 ZNF471Q9BX82 626 aaPredicted RBP7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 ACTR6Q9GZN1 396 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 NECTIN3Q9NQS3 549 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 ARMC1Q9NVT9 282 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 MARCH2Q9P0N8 246 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 CD300AQ9UGN4 299 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 UBQLN2Q9UHD9 624 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 UBE2QL1A1L167 161 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 H0YAE9 185 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 RPP14O95059 124 aaKnown RBP7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 THP07101 528 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 LCN1P31025 176 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 MAGEA12P43365 314 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 RPIAP49247 311 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 CCR4P51679 360 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 UBE2MP61081 183 aaKnown RBP7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 SMCO1Q147U7 214 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 NTRK2Q16620 822 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 ARHGAP15Q53QZ3 475 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 C18orf63Q68DL7 685 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 PNCKQ6P2M8 343 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 GPRIN1Q7Z2K8 1008 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 NKAPQ8N5F7 415 aaKnown RBP7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 ATP6V0D2Q8N8Y2 350 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 B3GNT7Q8NFL0 401 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 NEIL3Q8TAT5 605 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 SH3RF2Q8TEC5 729 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 CASTOR1Q8WTX7 329 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 VMP1Q96GC9 406 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 VRTNQ9H8Y1 702 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 PCDHB16Q9NRJ7 776 aa7.53□□□□□ -1.2
ATP2C1-208ENST00000504948 SMIM28A0A1B0GU29 152 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 A0A1W2PQH9 124 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 GFRA2O00451 464 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 MAFO75444 373 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 IGFBP1P08833 259 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 HTR3AP46098 478 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 SLC11A2P49281 568 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 SRP9P49458 86 aaKnown RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 RFTN1Q14699 578 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 GPR19Q15760 415 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 KYAT1Q16773 422 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 RNF219Q5W0B1 726 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 TAPT1Q6NXT6 567 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 MZT2AQ6P582 158 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 SH2D5Q6ZV89 423 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 UBE2R2Q712K3 238 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 KIF18BQ86Y91 864 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 ZNF280BQ86YH2 543 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 ZDHHC17Q8IUH5 632 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 MFSD2AQ8NA29 543 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 OR51G2Q8NGK0 314 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 OR10T2Q8NGX3 314 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 SLC22A8Q8TCC7 542 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 CACNG6Q9BXT2 260 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 KCNN3Q9UGI6 736 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 ZNF879B4DU55 563 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 B8ZZF3 427 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 TLR4O00206 839 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 LYRM1O43325 122 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 FRS3O43559 492 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 HYAL3O43820 417 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 EFCAB14O75071 495 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 DDNO94850 711 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 ZNF432O94892 652 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 CKMP06732 381 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 ETFAP13804 333 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 PVALBP20472 110 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 FPR1P21462 350 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 ADH7P40394 386 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 VLDLRP98155 873 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 IFITM2Q01629 132 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 CARD16Q5EG05 197 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 METTL2BQ6P1Q9 378 aaKnown RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 HSDL2Q6YN16 418 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 DDX53Q86TM3 631 aaKnown RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 CILP2Q8IUL8 1156 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 C11orf65Q8NCR3 313 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 CA5BP1Q8WTZ4 195 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 GCDHQ92947 438 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 SGTBQ96EQ0 304 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 METTL2AQ96IZ6 378 aaKnown RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 C2orf49Q9BVC5 232 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 IKZF5Q9H5V7 419 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 GPN2Q9H9Y4 310 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 MGAT4CQ9UBM8 478 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 SLC23A1Q9UHI7 598 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 MAFFQ9ULX9 164 aa7.52□□□□□ -1.21
ATP2C1-208ENST00000504948 AKAP6Q13023 2319 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms