RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 HIST1H1TP22492 207 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 TACR1P25103 407 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ATP5A1P25705 553 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SERPINB1P30740 379 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 GRK3P35626 688 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 MAPK10P53779 464 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 HNRNPH2P55795 449 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 RAB8AP61006 207 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ASPHQ12797 758 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SRSF6Q13247 344 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CLN3Q13286 438 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 RBBP5Q15291 538 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SYT16Q17RD7 645 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 DEFB134Q4QY38 66 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 C6orf136Q5SQH8 315 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 TMTC4Q5T4D3 741 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 DCAF12Q5T6F0 453 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 VWA5B1Q5TIE3 1220 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 RIPOR1Q6ZS17 1223 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 TTLL10Q6ZVT0 673 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ADCK2Q7Z695 626 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 LAPTM4BQ86VI4 370 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ZFAND4Q86XD8 727 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 KRT78Q8N1N4 520 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ZCCHC7Q8N3Z6 543 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 AMER2Q8N7J2 671 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 OR9A4Q8NGU2 314 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SNIP1Q8TAD8 396 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ADAMTS17Q8TE56 1095 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 PPP4R1Q8TF05 950 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 STON2Q8WXE9 905 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 UCN3Q969E3 161 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 UBE2E3Q969T4 207 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 MTFMTQ96DP5 389 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CMTM7Q96FZ5 175 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 METTL2AQ96IZ6 378 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 MAGEB10Q96LZ2 347 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 C17orf62Q9BQA9 187 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 EBF4Q9BQW3 602 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 TGIF2Q9GZN2 237 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ILKAPQ9H0C8 392 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ACBD3Q9H3P7 528 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF385DQ9H6B1 395 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ACTR5Q9H9F9 607 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ADGRE2Q9UHX3 823 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SERTAD3Q9UJW9 196 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CES1P1Q9UKY3 287 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 DAPP1Q9UN19 280 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ERVK-11Q9UQG0 969 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 NAALAD2Q9Y3Q0 740 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ANGPTL3Q9Y5C1 460 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 PCDHGA6Q9Y5G7 932 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CPAMD8Q8IZJ3 1885 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 IGKV3D-11A0A0A0MRZ8 115 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 A0A0G2JN53 185 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 LOC101059948A0A1B0GTJ6 334 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ATP6AP2A0A1C7CYW4 349 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 A0A1W2PS29 197 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 OR2W5A6NFC9 320 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ANKDD1BA6NHY2 528 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 WASHC1A8K0Z3 465 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 C1QTNF9BB2RNN3 333 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SGK494L7N484 410 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SAP18O00422 153 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 TXNDC9O14530 226 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 HDAC3O15379 428 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ERI3O43414 337 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CPNE3O75131 537 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 SH3BGRLO75368 114 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 JRKO75564 520 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ATP6AP2O75787 350 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 RSL1D1O76021 490 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 BMP10O95393 424 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 TGDSO95455 350 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 HSPA4LO95757 839 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 KRT6AP02538 564 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 GBAP04062 536 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 KRT6BP04259 564 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 EIF2S1P05198 315 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 UMODP07911 640 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 C1QTNF9P0C862 333 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 JMJD7P0C870 316 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 PTX3P26022 381 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CERS1P27544 350 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CD82P27701 267 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 STAT5AP42229 794 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 OR1D4P47884 311 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 KRT6CP48668 564 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 ARSFP54793 590 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 LIM2P55344 173 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 IGLV3-21P80748 117 aaPredicted RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 MAT1AQ00266 395 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 DDX39BQ13838 428 aaKnown RBP4.67□□□□□ -1.66
LMNB1-208ENST00000504788 CEBPEQ15744 281 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 RBBP7Q16576 425 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 NKG7Q16617 165 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 MPEG1Q2M385 716 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 MUM1Q2TAK8 710 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 FAM214AQ32MH5 1076 aa4.67□□□□□ -1.66
LMNB1-208ENST00000504788 NKAIN1Q4KMZ8 207 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms