RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 NDUFAF5Q5TEU4 345 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 FAM46CQ5VWP2 391 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 METRNLQ641Q3 311 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 TMIGD1Q6UXZ0 262 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 USP50Q70EL3 339 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 DCUN1D3Q8IWE4 304 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 ICA1LQ8NDH6 482 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 C12orf42Q96LP6 360 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 TSNARE1Q96NA8 513 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 TUBGCP2Q9BSJ2 902 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 ABHD14AQ9BUJ0 271 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 ATG10Q9H0Y0 220 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 LYRM4Q9HD34 91 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 PAQR5Q9NXK6 330 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 TFCP2L1Q9NZI6 479 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 PSMC3IPQ9P2W1 217 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 A0A1B0GTW7 788 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 JAK2O60674 1132 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 CST1P01037 141 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 APOA1P02647 267 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 ITGB3P05106 788 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 GCSHP23434 173 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 IL32P24001 234 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 APOBEC3AP31941 199 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 MAPK12P53778 367 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 NHLH2Q02577 135 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 ITIH4Q14624 930 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 NR1I3Q14994 352 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 SUSD4Q5VX71 490 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 THOC7Q6I9Y2 204 aaKnown RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 ASCL4Q6XD76 172 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 COLCA1Q6ZS62 124 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 RBM45Q8IUH3 476 aaKnown RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 GPR135Q8IZ08 494 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 RBFAQ8N0V3 343 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 SMYD1Q8NB12 490 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 PROKR1Q8TCW9 393 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 EMG1Q92979 244 aaKnown RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 LHX4Q969G2 390 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 TSSK3Q96PN8 268 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 MCRIP2Q9BUT9 160 aaKnown RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 NMNAT2Q9BZQ4 307 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 RPH3ALQ9UNE2 315 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 LRP12Q9Y561 859 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 WNT6Q9Y6F9 365 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 A8MXQ7 604 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 TMEM189-UBE2V1I3L0A0 370 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 LCE2BO14633 110 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 TIMM8AO60220 97 aaPredicted RBP4.92□□□□□ -1.62
NIPBL-204ENST00000504430 KRT36O76013 467 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 SLURP2P0DP57 97 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 GNSP15586 552 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 CEBPBP17676 345 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 PIK3R1P27986 724 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 RHAGQ02094 409 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 CFHR1Q03591 330 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 UBE2V1Q13404 147 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.92□□□□□ -1.62
NIPBL-204ENST00000504430 FAM198BQ6UWH4 519 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 FRA10AC1Q70Z53 315 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 LHFPL4Q7Z7J7 247 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 AKAP14Q86UN6 197 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 STX12Q86Y82 276 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 PLCZ1Q86YW0 608 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 TMPRSS6Q8IU80 811 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 ARHGAP24Q8N264 748 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 FAM109AQ8N4B1 249 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 OR51L1Q8NGJ5 315 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 SENP5Q96HI0 755 aaPredicted RBP4.92□□□□□ -1.62
NIPBL-204ENST00000504430 PGBD1Q96JS3 809 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 PNKPQ96T60 521 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 TMEM47Q9BQJ4 181 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 LHPPQ9H008 270 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 RBAKQ9NYW8 714 aaPredicted RBP4.92□□□□□ -1.62
NIPBL-204ENST00000504430 RNF14Q9UBS8 474 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 TMEM129A0AVI4 362 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 PRR19A6NJB7 356 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 CABYRO75952 493 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 CAPN1P07384 714 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 ADH4P08319 380 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 RAB40ALP0C0E4 278 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 GJB2P29033 226 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 GNG10P50151 68 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 HSPB3Q12988 150 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 SF3B4Q15427 424 aaKnown RBP eCLIP4.92□□□□□ -1.624e-6■■■■■ 29.1
NIPBL-204ENST00000504430 EIF2S3LQ2VIR3 472 aaKnown RBP4.92□□□□□ -1.62
NIPBL-204ENST00000504430 KIRREL2Q6UWL6 708 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 PLXDC2Q6UX71 529 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 OR5M1Q8NGP8 315 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 OR52I2Q8NH67 350 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 SEPT8Q92599 483 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 SEMA4DQ92854 862 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 ERGIC1Q969X5 290 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 ASB9Q96DX5 294 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 NPAS1Q99742 590 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 TRMOQ9BU70 441 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 CHID1Q9BWS9 393 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 C1QTNF1Q9BXJ1 281 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 AMBRA1Q9C0C7 1298 aa4.92□□□□□ -1.62
NIPBL-204ENST00000504430 WWTR1Q9GZV5 400 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms