RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 TRIM40Q6P9F5 258 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 ZNF793Q6ZN11 406 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 SHISA6Q6ZSJ9 500 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 CHSY3Q70JA7 882 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 PRSS58Q8IYP2 241 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 ESX1Q8N693 406 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 PROKR1Q8TCW9 393 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 LRRC8CQ8TDW0 803 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 TWIST2Q8WVJ9 160 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 ZCCHC14Q8WYQ9 949 aaKnown RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 SEC16BQ96JE7 1060 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 LRFN5Q96NI6 719 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 SERPINI1Q99574 410 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 MRPL1Q9BYD6 325 aaKnown RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 RBCK1Q9BYM8 510 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 ILKAPQ9H0C8 392 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 SLCO1B3Q9NPD5 702 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 PRDM7Q9NQW5 492 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 IFT80Q9P2H3 777 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 MARCOQ9UEW3 520 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 GIMAP2Q9UG22 337 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 CROTQ9UKG9 612 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 ACSL6Q9UKU0 697 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 LHX6Q9UPM6 363 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 RAP2CQ9Y3L5 183 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 MRPS18BQ9Y676 258 aaKnown RBP12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 CCDC88CQ9P219 2028 aa12.57□□□□□ -0.4
PDLIM7-212ENST00000504380 SEC16AO15027 2179 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 SCN2AQ99250 2005 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 CHST10O43529 356 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 JRKO75564 520 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 NSA2O95478 260 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 LIPCP11150 499 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 AGXTP21549 392 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 STAT5AP42229 794 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 GYS2P54840 703 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 RPS18P62269 152 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 OCRLQ01968 901 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 GUCY1A3Q02108 690 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 MAP7Q14244 749 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 HERC3Q15034 1050 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 PDCD2Q16342 344 aaPredicted RBP12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 TMEM35AQ53FP2 167 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 OR4C11Q6IEV9 310 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 FAM198BQ6UWH4 519 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 RIPOR1Q6ZS17 1223 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 FAM47EQ6ZV65 393 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 DDIASQ8IXT1 998 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 IL22RA1Q8N6P7 574 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 OR2T11Q8NH01 316 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 FAM76AQ8TAV0 307 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 RAB3IL1Q8TBN0 382 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 RGMAQ96B86 450 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 APIPQ96GX9 242 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 FAR2Q96K12 515 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 C3orf30Q96M34 536 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 DCBLD2Q96PD2 775 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 THAP1Q9NVV9 213 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 TRPC4Q9UBN4 977 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 CTSFQ9UBX1 484 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 IL17BQ9UHF5 180 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 CDC14AQ9UNH5 594 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 RAXQ9Y2V3 346 aa12.56□□□□□ -0.4
PDLIM7-212ENST00000504380 OR2W5A6NFC9 320 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 FAM227AF5H4B4 570 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 KLF11O14901 512 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 KLK10O43240 276 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 CHEK2O96017 543 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 LIFP15018 202 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 WT1P19544 449 aaPredicted RBP12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 ATP5A1P25705 553 aaKnown RBP12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 BSGP35613 385 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 DLSTP36957 453 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 SSR2P43308 183 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 RPL14P50914 215 aaKnown RBP12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 TBL3Q12788 808 aaKnown RBP12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 CSTF3Q12996 717 aaKnown RBP12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 DNASE1L3Q13609 305 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 CUL3Q13618 768 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 IMPG1Q17R60 797 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 AP5B1Q2VPB7 878 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 VWA2Q5GFL6 755 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 SPDYAQ5MJ70 313 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 PRMT9Q6P2P2 845 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 ZNF517Q6ZMY9 492 aaPredicted RBP12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 OVCH1Q7RTY7 1134 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 CA13Q8N1Q1 262 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 ARFGAP2Q8N6H7 521 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 C1orf52Q8N6N3 182 aaKnown RBP12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 ENDOVQ8N8Q3 282 aaKnown RBP12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 ACOT4Q8N9L9 421 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 OR51Q1Q8NH59 317 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 KCNE4Q8WWG9 221 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 PEX11GQ96HA9 241 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 MAGEB18Q96M61 343 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 KCNC2Q96PR1 638 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 TBCDQ9BTW9 1192 aa12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 ZNF717Q9BY31 904 aaPredicted RBP12.55□□□□□ -0.4
PDLIM7-212ENST00000504380 SOX17Q9H6I2 414 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms