RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 PIF1Q9H611 641 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 TMEM38AQ9H6F2 299 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 HMG20AQ9NP66 347 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 FAM118AQ9NWS6 357 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 LYARQ9NX58 379 aaKnown RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 WBP1LQ9NX94 342 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 QPCTLQ9NXS2 382 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 EHD3Q9NZN3 535 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 C7orf72A4D263 438 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 PDPK1O15530 556 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 JRKO75564 520 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 CCNKO75909 580 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 IFNW1P05000 195 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 ALPLP05186 524 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 ACADMP11310 421 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 INPP1P49441 399 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 RAB14P61106 215 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 AGERQ15109 404 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 C6orf141Q5SZD1 244 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 DUS1LQ6P1R4 473 aaKnown RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 RRM2BQ7LG56 351 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 ZZZ3Q8IYH5 903 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 PJA1Q8NG27 643 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 BADQ92934 168 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 NECTIN4Q96NY8 510 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 WRAP53Q9BUR4 548 aaKnown RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 LINC00597Q9H2U6 94 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 ACSS1Q9NUB1 689 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-203ENST00000502773 TMEM184CQ9NVA4 438 aa7.12□□□□□ -1.27
PDGFC-203ENST00000502773 DUXAA6NLW8 204 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 HEPACAM2A8MVW5 462 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 TNFRSF11BO00300 401 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 AREL1O15033 823 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 RGS10O43665 173 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 CLEC3AO75596 197 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 PRAMEF12O95522 483 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 GPC1P35052 558 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 MANFP55145 182 aaKnown RBP7.11□□□□□ -1.27
PDGFC-203ENST00000502773 ITGA1P56199 1179 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 DEFA1P59665 94 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 DEFA3P59666 94 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 ERVK-21P61565 698 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 TBPL1P62380 186 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 KIAA1614Q5VZ46 1190 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 KCTD8Q6ZWB6 473 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 PHC2Q8IXK0 858 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 CENPSQ8N2Z9 138 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 TTC29Q8NA56 475 aaPredicted RBP7.11□□□□□ -1.27
PDGFC-203ENST00000502773 HUS1BQ8NHY5 278 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 MRGPRX3Q96LB0 322 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 BBS4Q96RK4 519 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 DMRT3Q9NQL9 472 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 V9GYQ6 96 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 GREB1Q4ZG55 1949 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 PNMA8CA0A1B0GUJ8 204 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 LINC01553A4QN01 128 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 FAM149AA5PLN7 773 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 TNFRSF10AO00220 468 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 FAM20BO75063 409 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 ANGPTL1O95841 491 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 NKX2-5P52952 324 aaPredicted RBP7.11□□□□□ -1.27
PDGFC-203ENST00000502773 E2F2Q14209 437 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 TCEA2Q15560 299 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 REEP3Q6NUK4 255 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 OOSP2Q86WS3 158 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 ZFPM2Q8WW38 1151 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 ZNF566Q969W8 418 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 APIPQ96GX9 242 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 MTERF1Q99551 399 aaKnown RBP7.11□□□□□ -1.27
PDGFC-203ENST00000502773 EXD2Q9NVH0 621 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 CLN6Q9NWW5 311 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 PDP1Q9P0J1 537 aaPredicted RBP7.11□□□□□ -1.27
PDGFC-203ENST00000502773 PADI2Q9Y2J8 665 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 CHD5Q8TDI0 1954 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 COL4A6Q14031 1691 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 FUOMA2VDF0 154 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 EFCAB10A6NFE3 127 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 A8MU76 341 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 FADS2P1A8MWK0 482 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 ZW10O43264 779 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 ICMTO60725 284 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 MMP20O60882 483 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 SLC16A8O95907 504 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 CEBPBP17676 345 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 SHMT2P34897 504 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 DCTP40126 519 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 KHKP50053 298 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 DSTNP60981 165 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 RPS13P62277 151 aaKnown RBP7.11□□□□□ -1.27
PDGFC-203ENST00000502773 CDK6Q00534 326 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 B4GALNT1Q00973 533 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 SCARB2Q14108 478 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 NEDD8Q15843 81 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 DUSP6Q16828 381 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 AAK1Q2M2I8 961 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 CYBRD1Q53TN4 286 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 PRAMEF8Q5VWM4 474 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 PRAMEF7Q5VXH5 474 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 PNCKQ6P2M8 343 aa7.11□□□□□ -1.27
PDGFC-203ENST00000502773 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms