RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 SELENBP1Q13228 472 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 TIMM50Q3ZCQ8 353 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 KIAA1841Q6NSI8 718 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 KIAA1211LQ6NV74 962 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 RASGEF1AQ8N9B8 481 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 C16orf78Q8WTQ4 265 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 TOX2Q96NM4 488 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 HEPHQ9BQS7 1158 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 ITM2CQ9NQX7 267 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 MRPS18AQ9NVS2 196 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 SPG21Q9NZD8 308 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 REV1Q9UBZ9 1251 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 SOD1P00441 154 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 C1GALT1C1LP0DN25 315 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 UQCRC2P22695 453 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 IRS1P35568 1242 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 HBA1P69905 142 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 OCLNQ16625 522 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 EXOC3L2Q2M3D2 409 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 TRIM40Q6P9F5 258 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 LCTLQ6UWM7 567 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 SLC22A16Q86VW1 577 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 RNF130Q86XS8 419 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 P3H2Q8IVL5 708 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 LGI4Q8N135 537 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 OR10Q1Q8NGQ4 319 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 UBE2E3Q969T4 207 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 OTUB2Q96DC9 234 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 NEURL3Q96EH8 262 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 TMEM169Q96HH4 297 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 ABHD8Q96I13 439 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 SDHCQ99643 169 aaPredicted RBP6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 MOV10Q9HCE1 1003 aaKnown RBP6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 ISYNA1Q9NPH2 558 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 GULP1Q9UBP9 304 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 DOLKQ9UPQ8 538 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 IFT52Q9Y366 437 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 GPC6Q9Y625 555 aaPredicted RBP6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 DOCK6Q96HP0 2047 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 NOTCH4Q99466 2003 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 NRG2O14511 850 aaPredicted RBP6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 SPINT1O43278 529 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 PAPLNO95428 1278 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 LGI1O95970 557 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 LINC00271P0C7V0 271 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 TRAPPC2P0DI81 140 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 TRAPPC2BP0DI82 140 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 NPPBP16860 134 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 GABRR2P28476 465 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 WEE1P30291 646 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 CYP4F8P98187 520 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 ILKQ13418 452 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 LAPTM4AQ15012 233 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 COX20Q5RI15 118 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 CCDC149Q6ZUS6 474 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 ARMCX6Q7L4S7 300 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 MRGPREQ86SM8 312 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 RNF175Q8N4F7 328 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 CHST14Q8NCH0 376 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 FLCNQ8NFG4 579 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 ABCG8Q9H221 673 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 ZDHHC6Q9H6R6 413 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 PELI2Q9HAT8 420 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 ZBTB20Q9HC78 741 aaPredicted RBP6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 TRIM39Q9HCM9 518 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 TAS2R9Q9NYW1 312 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 ANGPT4Q9Y264 503 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 CFL2Q9Y281 166 aa6.91□□□□□ -1.3
LYSMD3-203ENST00000500869 HTR3EA5X5Y0 456 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 TEX28O15482 410 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 DIRAS1O95057 198 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 KCNK2O95069 426 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 CPSF4O95639 269 aaKnown RBP6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 SCG5P05408 212 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 NR4A1P22736 598 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 ACADLP28330 430 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 PPM1AP35813 382 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 EFNB1P98172 346 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 DPTQ07507 201 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 TPRG1LQ5T0D9 272 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 DEPDC1Q5TB30 811 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 STEAP3Q658P3 488 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 PAGE2Q7Z2X7 111 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 COMMD6Q7Z4G1 85 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 SLC44A2Q8IWA5 706 aaPredicted RBP6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 UBE2FQ969M7 185 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 KCNC2Q96PR1 638 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 NIPSNAP1Q9BPW8 284 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 SLC35A5Q9BS91 424 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 ZNF717Q9BY31 904 aaPredicted RBP6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 DPEP2Q9H4A9 486 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 PCDH12Q9NPG4 1184 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 CCDC177Q9NQR7 707 aaPredicted RBP6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 ASAH2Q9NR71 780 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 GRIP1Q9Y3R0 1128 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 TRIM17Q9Y577 477 aa6.9□□□□□ -1.3
LYSMD3-203ENST00000500869 KCNE2Q9Y6J6 123 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms