RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 SEC14L6B5MCN3 397 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 C22orf46C9J442 243 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HHLA1C9JL84 531 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 UBE2Q2LH0YL09 131 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 EYA2O00167 538 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PCDH17O14917 1159 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HNRNPDLO14979 420 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 MCF2LO15068 1137 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 UGT1A9O60656 530 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 RPS6KA5O75582 802 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 STARD3NLO95772 234 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 IFNA7P01567 189 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 HLA-DOAP06340 250 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 LDHBP07195 334 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 NCAM1P13591 858 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GGT1P19440 569 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 NR1D1P20393 614 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CHRNA7P36544 502 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CCT5P48643 541 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MAPKAPK2P49137 400 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GABARAPL2P60520 117 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ERHP84090 104 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 REG3AQ06141 175 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 RAD51Q06609 339 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ITGB3BPQ13352 177 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 TWIST1Q15672 202 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CNGA2Q16280 664 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CDO1Q16878 200 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 KCTD19Q17RG1 926 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 SMTNL2Q2TAL5 461 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MOGAT2Q3SYC2 334 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FUT11Q495W5 492 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CDNFQ49AH0 187 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PDLIM3Q53GG5 364 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 SLC25A53Q5H9E4 307 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 RABGAP1LQ5R372 815 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TMEM201Q5SNT2 666 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TPRG1LQ5T0D9 272 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CDPF1Q6NVV7 123 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 KIRREL2Q6UWL6 708 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 USP30Q70CQ3 517 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ABHD13Q7L211 337 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MAEAQ7L5Y9 396 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PAGE2Q7Z2X7 111 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 EFL1Q7Z2Z2 1120 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 ARMC9Q7Z3E5 817 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SPRED2Q7Z698 418 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 RNF180Q86T96 592 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 LRRTM3Q86VH5 581 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 LRP11Q86VZ4 500 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TRIM48Q8IWZ4 208 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PPIL6Q8IXY8 311 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 DEFB119Q8N690 84 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 IPMKQ8NFU5 416 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 OR13C3Q8NGS6 347 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 OR8S1Q8NH09 359 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 BAHD1Q8TBE0 780 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 COG1Q8WTW3 980 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 BLNKQ8WV28 456 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 EEF1AKMT1Q8WVE0 214 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PIBF1Q8WXW3 757 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ISL2Q96A47 359 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ULK4Q96C45 1275 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ORAI1Q96D31 301 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PHF21BQ96EK2 531 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TMEM87BQ96K49 555 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GMLQ99445 158 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 CCT7Q99832 543 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 NTPCRQ9BSD7 190 aaKnown RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 TRAIPQ9BWF2 469 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MND1Q9BWT6 205 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FAM192AQ9GZU8 254 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 PORCNQ9H237 461 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TNKS2Q9H2K2 1166 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SLC40A1Q9NP59 571 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.36□□□□□ -2.19
XRN1-214ENST00000498077 TMEM100Q9NV29 134 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 AURKAIP1Q9NWT8 199 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 WRAP73Q9P2S5 460 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 ERRFI1Q9UJM3 462 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 SCML1Q9UN30 329 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 BTRCQ9Y297 605 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 OR2W1Q9Y3N9 320 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 COL11A1P12107 1806 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 PCM1Q15154 2024 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 A0A1B0GUL6 1792 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ATRQ13535 2644 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 A0A1W2PQ45 241 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 A0A1W2PQY0 241 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 FAM234BA2RU67 622 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 C5orf60A6NFR6 353 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SYT7O43581 403 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 SULT1B1O43704 296 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 GLRA3O75311 464 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ENTPD5O75356 428 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 EGFP01133 1207 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 TK1P04183 234 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 ELANEP08246 267 aa1.36□□□□□ -2.19
XRN1-214ENST00000498077 MYCLP1P12525 358 aaPredicted RBP1.36□□□□□ -2.19
XRN1-214ENST00000498077 P4HA1P13674 534 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms