RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 A0A088AWK7 358 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 LOC101059948A0A1B0GTJ6 334 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 TCP11X1B4DZS4 312 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.27□□□□□ -0.61
CUX1-210ENST00000497815 C9J4A7 227 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 SLC28A1O00337 649 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 RGS14O43566 566 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 B3GALT2O43825 422 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 GBAP04062 536 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 JUNP05412 331 aaKnown RBP11.27□□□□□ -0.61
CUX1-210ENST00000497815 HSD3B1P14060 373 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 TCN2P20062 427 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 ZNF10P21506 573 aaPredicted RBP11.27□□□□□ -0.61
CUX1-210ENST00000497815 ATP5A1P25705 553 aaKnown RBP11.27□□□□□ -0.61
CUX1-210ENST00000497815 HSD3B2P26439 372 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 DLSTP36957 453 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 STAT5AP42229 794 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 GYS2P54840 703 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 MTTPP55157 894 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 FOXL2P58012 376 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 SKP1P63208 163 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 DSG2Q14126 1118 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 MAP7Q14244 749 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 NR6A1Q15406 480 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 OR4C11Q6IEV9 310 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 FAM198BQ6UWH4 519 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 UNQ6494/PRO21346Q6UXR6 183 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 ZNF793Q6ZN11 406 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 SHISA6Q6ZSJ9 500 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 COX15Q7KZN9 410 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 TRIM46Q7Z4K8 759 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 VASH2Q86V25 355 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 DTX1Q86Y01 620 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 CRLF3Q8IUI8 442 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 PRSS58Q8IYP2 241 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 C1orf52Q8N6N3 182 aaKnown RBP11.27□□□□□ -0.61
CUX1-210ENST00000497815 ACOT4Q8N9L9 421 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 SRFBP1Q8NEF9 429 aaKnown RBP11.27□□□□□ -0.61
CUX1-210ENST00000497815 OR2T11Q8NH01 316 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 KCNE4Q8WWG9 221 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 QRFPRQ96P65 431 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 SERINC2Q96SA4 455 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 DPH2Q9BQC3 489 aaPredicted RBP11.27□□□□□ -0.61
CUX1-210ENST00000497815 TBCDQ9BTW9 1192 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 TMEM121BQ9BXQ6 578 aaPredicted RBP11.27□□□□□ -0.61
CUX1-210ENST00000497815 RBCK1Q9BYM8 510 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 PRDM7Q9NQW5 492 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 PSD3Q9NYI0 1048 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 AHSPQ9NZD4 102 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 TRPC4Q9UBN4 977 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 CTSFQ9UBX1 484 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 CROTQ9UKG9 612 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 PPT2Q9UMR5 302 aa11.27□□□□□ -0.61
CUX1-210ENST00000497815 MDC1Q14676 2089 aaKnown RBP11.26□□□□□ -0.61
CUX1-210ENST00000497815 ATP6AP2A0A1C7CYW4 349 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 H0YIG0 161 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 POLR3GO15318 223 aaPredicted RBP11.26□□□□□ -0.61
CUX1-210ENST00000497815 CHST10O43529 356 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 EEDO75530 441 aaKnown RBP11.26□□□□□ -0.61
CUX1-210ENST00000497815 ATP6AP2O75787 350 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 SEMA3DO95025 777 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 KLK1P06870 262 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 PIM1P11309 404 aaPredicted RBP11.26□□□□□ -0.61
CUX1-210ENST00000497815 HIST1H1TP22492 207 aaPredicted RBP11.26□□□□□ -0.61
CUX1-210ENST00000497815 BSGP35613 385 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 MDH1P40925 334 aaKnown RBP11.26□□□□□ -0.61
CUX1-210ENST00000497815 ZNF33BQ06732 778 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 TBL3Q12788 808 aaKnown RBP11.26□□□□□ -0.61
CUX1-210ENST00000497815 CLN3Q13286 438 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 SLAMF1Q13291 335 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 RUNX2Q13950 521 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 GALNTL6Q49A17 601 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 FAM69BQ5VUD6 431 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 CYP20A1Q6UW02 462 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 COMMD6Q7Z4G1 85 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 NUDT13Q86X67 352 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 METTL4Q8N3J2 472 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 ENDOVQ8N8Q3 282 aaKnown RBP11.26□□□□□ -0.61
CUX1-210ENST00000497815 ZNF248Q8NDW4 579 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 OR51Q1Q8NH59 317 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 C19orf60Q96EN9 201 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 APIPQ96GX9 242 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 PEX11GQ96HA9 241 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 C3orf30Q96M34 536 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 C7orf26Q96N11 449 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 ZNF717Q9BY31 904 aaPredicted RBP11.26□□□□□ -0.61
CUX1-210ENST00000497815 NUF2Q9BZD4 464 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 ROGDIQ9GZN7 287 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 GIMAP2Q9UG22 337 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 HAO1Q9UJM8 370 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 MAP4K5Q9Y4K4 846 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 SPTBN2O15020 2390 aa11.26□□□□□ -0.61
CUX1-210ENST00000497815 ARHGAP10A1A4S6 786 aa11.25□□□□□ -0.61
CUX1-210ENST00000497815 SERTM1A2A2V5 107 aa11.25□□□□□ -0.61
CUX1-210ENST00000497815 FAM227AF5H4B4 570 aa11.25□□□□□ -0.61
CUX1-210ENST00000497815 KLK10O43240 276 aa11.25□□□□□ -0.61
CUX1-210ENST00000497815 CNOT3O75175 753 aaKnown RBP11.25□□□□□ -0.61
CUX1-210ENST00000497815 PEX11AO75192 247 aa11.25□□□□□ -0.61
CUX1-210ENST00000497815 SEC22BO75396 215 aa11.25□□□□□ -0.61
CUX1-210ENST00000497815 JRKO75564 520 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms