RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 OR5AK3PQ8NH89 298 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 COG8Q96MW5 612 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 NRTNQ99748 197 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 ZNF717Q9BY31 904 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-220ENST00000496711 PBX4Q9BYU1 374 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 PITHD1Q9GZP4 211 aaPredicted RBP12.47□□□□□ -0.41
GARNL3-220ENST00000496711 KRT84Q9NSB2 600 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 TAAR2Q9P1P5 351 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 ZFR2Q9UPR6 939 aaKnown RBP12.47□□□□□ -0.41
GARNL3-220ENST00000496711 HSPE1-MOB4S4R3N1 261 aa12.47□□□□□ -0.41
GARNL3-220ENST00000496711 A0A1W2PPV9 198 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 TMEM229AB2RXF0 380 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 SEC14L2O76054 403 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 KRT75O95678 551 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 TBX6O95947 436 aaPredicted RBP12.46□□□□□ -0.41
GARNL3-220ENST00000496711 HTR1AP08908 422 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 CCDC159P0C7I6 412 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 CYP4B1P13584 511 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 CALRP27797 417 aaKnown RBP12.46□□□□□ -0.41
GARNL3-220ENST00000496711 PRIM2P49643 509 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 CLK3P49761 638 aaKnown RBP12.46□□□□□ -0.41
GARNL3-220ENST00000496711 MAPK12P53778 367 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 CASP9P55211 416 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 NUP107P57740 925 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 GRSF1Q12849 480 aaKnown RBP eCLIP12.46□□□□□ -0.41
GARNL3-220ENST00000496711 TUBA3CQ13748 450 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 FGL2Q14314 439 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 SHHQ15465 462 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 SLC5A12Q1EHB4 618 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 ZNF630Q2M218 657 aaPredicted RBP12.46□□□□□ -0.41
GARNL3-220ENST00000496711 ANKRD54Q6NXT1 300 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 FAHD1Q6P587 224 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 SYCE2Q6PIF2 218 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 PAGE2Q7Z2X7 111 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 RNF130Q86XS8 419 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 SPARTQ8N0X7 666 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 MMP21Q8N119 569 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 ATG16L2Q8NAA4 619 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 NFKBIDQ8NI38 313 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 SPPL2AQ8TCT8 520 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 TIMM29Q9BSF4 260 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 SLC6A16Q9GZN6 736 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 OSGEPL1Q9H4B0 414 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 NT5DC2Q9H857 520 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 C1GALT1Q9NS00 363 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 EXD2Q9NVH0 621 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 ICKQ9UPZ9 632 aa12.46□□□□□ -0.41
GARNL3-220ENST00000496711 WBP11Q9Y2W2 641 aaKnown RBP12.46□□□□□ -0.41
GARNL3-220ENST00000496711 ADAMDEC1O15204 470 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 CAPN5O15484 640 aaPredicted RBP12.46□□□□□ -0.42
GARNL3-220ENST00000496711 LINC01565O15544 149 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 TBX19O60806 448 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 OPN1SWP03999 348 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 DDCP20711 480 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 RRM2P31350 389 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 BSGP35613 385 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 SEC13P55735 322 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 RPS21P63220 83 aaKnown RBP12.46□□□□□ -0.42
GARNL3-220ENST00000496711 CDK5R2Q13319 367 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 SIM2Q14190 667 aaPredicted RBP12.46□□□□□ -0.42
GARNL3-220ENST00000496711 IFI44LQ53G44 452 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 PPP2R2DQ66LE6 453 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 DHRS4L2Q6PKH6 230 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 PARM1Q6UWI2 310 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 CCDC80Q76M96 950 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 NUDT13Q86X67 352 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 TTC29Q8NA56 475 aaPredicted RBP12.46□□□□□ -0.42
GARNL3-220ENST00000496711 CNIH3Q8TBE1 160 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 LZICQ8WZA0 190 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 SGCDQ92629 289 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 FGF14Q92915 247 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 DTNBP1Q96EV8 351 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 C12orf66Q96MD2 445 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 QRFPRQ96P65 431 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 F2RL3Q96RI0 385 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 FERD3LQ96RJ6 166 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 APOL4Q9BPW4 351 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 NKX2-4Q9H2Z4 354 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 RUBCNLQ9H714 662 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 ANGPT4Q9Y264 503 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 WDR37Q9Y2I8 494 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 NAALAD2Q9Y3Q0 740 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 MAP4K5Q9Y4K4 846 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 GMPPBQ9Y5P6 360 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 SNX5Q9Y5X3 404 aa12.46□□□□□ -0.42
GARNL3-220ENST00000496711 CCDC88CQ9P219 2028 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 FEZF1A0PJY2 475 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 EPOPA6NHQ4 379 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 H7BY64 318 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 RTCAO00442 366 aaKnown RBP12.45□□□□□ -0.42
GARNL3-220ENST00000496711 NDUFS4O43181 175 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 ATE1O95260 518 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 ANGPTL1O95841 491 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 PAK4O96013 591 aaPredicted RBP12.45□□□□□ -0.42
GARNL3-220ENST00000496711 ARAFP10398 606 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 DDX5P17844 614 aaKnown RBP12.45□□□□□ -0.42
GARNL3-220ENST00000496711 UQCRC2P22695 453 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 SOX9P48436 509 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 CDK6Q00534 326 aa12.45□□□□□ -0.42
GARNL3-220ENST00000496711 EEF1A2Q05639 463 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms