RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 TXNL4BQ9NX01 149 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 THUMPD1Q9NXG2 353 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 KCTD5Q9NXV2 234 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 GIMAP2Q9UG22 337 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PFDN2Q9UHV9 154 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 SSR3Q9UNL2 185 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 DENND4AQ7Z401 1863 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 A0A087WZ62 844 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 IGKV6-21A0A0C4DH24 114 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 LCHNA4D1U4 455 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 RRN3P2A6NIE6 340 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 HMSDA8MTL9 139 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 SMLR1H3BR10 107 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 M0R233 179 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 GFRA2O00451 464 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PRAF2O60831 178 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 TP53P04637 393 aaPredicted RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PRF1P14222 555 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 TAL1P17542 331 aaPredicted RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CHRNA5P30532 468 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CRISP3P54108 245 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CDKN2DP55273 166 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CSTF1Q05048 431 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CTBP1Q13363 440 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PICALMQ13492 652 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PCBP2Q15366 365 aaKnown RBP eCLIP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 OR4D1Q15615 310 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 ZNF124Q15973 351 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 OCLNQ16625 522 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 SUPT20HL1Q3ZLR7 823 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PLK5Q496M5 336 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 FLYWCH1Q4VC44 716 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 SLC39A12Q504Y0 691 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 AFMIDQ63HM1 303 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 FAM9CQ8IZT9 166 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 FAM71CQ8NEG0 241 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 OR56A4Q8NGH8 313 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 OR10A6Q8NH74 314 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 LPPQ93052 612 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PHF21BQ96EK2 531 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 FAM120BQ96EK7 910 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 FCRL1Q96LA6 429 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PPM1MQ96MI6 270 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PDCD2LQ9BRP1 358 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 DPCDQ9BVM2 203 aaPredicted RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 SPATA5L1Q9BVQ7 753 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 BBS2Q9BXC9 721 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 SLC29A3Q9BZD2 475 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 EGLN1Q9GZT9 426 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CHST8Q9H2A9 424 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 TTYH1Q9H313 450 aaPredicted RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 ALG9Q9H6U8 611 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PXMP2Q9NR77 195 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 GPR83Q9NYM4 423 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 NYNRINQ9P2P1 1898 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 FIS1Q9Y3D6 152 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 ZNF106Q9H2Y7 1883 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 E9PAM4 449 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 GPR171O14626 319 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PPEF2O14830 753 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PPM1DO15297 605 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 RPS6KA4O75676 772 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 HPP00738 406 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CPN1P15169 458 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 ZNF3P17036 446 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 ICAM3P32942 547 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 OLIG2Q13516 323 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 UBXN2BQ14CS0 331 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 PYDC2Q56P42 97 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 C9orf131Q5VYM1 1079 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 NADSYN1Q6IA69 706 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 C3P1Q6ZMU1 363 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 RPS27LQ71UM5 84 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 TRIM46Q7Z4K8 759 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 ABI3BPQ7Z7G0 1075 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 VSIG10LQ86VR7 867 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 SPATA2LQ8IUW3 424 aaPredicted RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 LRRN4Q8WUT4 740 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 KCTD13Q8WZ19 329 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 KCTD12Q96CX2 325 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 CHFRQ96EP1 664 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 ZNF419Q96HQ0 510 aaPredicted RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 DIRAS2Q96HU8 199 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 SYT17Q9BSW7 474 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 OR51J1Q9H342 316 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 FZD8Q9H461 694 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 NSUN3Q9H649 340 aaKnown RBP4.61□□□□□ -1.67
PRKD3-210ENST00000494667 REEP1Q9H902 201 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 RNF19AQ9NV58 838 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 COQ3Q9NZJ6 369 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 MPP6Q9NZW5 540 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 NLKQ9UBE8 527 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 EXTL2Q9UBQ6 330 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 NEU3Q9UQ49 428 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 KIAA1671Q9BY89 1806 aa4.61□□□□□ -1.67
PRKD3-210ENST00000494667 TMEM229AB2RXF0 380 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 D6RAR5 112 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 DFFAO00273 331 aa4.6□□□□□ -1.67
PRKD3-210ENST00000494667 CACNB4O00305 520 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms