RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 SKP1P63208 163 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 TLE4Q04727 773 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 ZNF460Q14592 562 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 C18orf21Q32NC0 220 aaPredicted RBP11.81□□□□□ -0.52
SKA1-205ENST00000494518 TEDDM1Q5T9Z0 273 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 SBSNQ6UWP8 590 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 C16orf47Q6ZP98 133 aaPredicted RBP11.81□□□□□ -0.52
SKA1-205ENST00000494518 CEP128Q6ZU80 1094 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 THOC6Q86W42 341 aaKnown RBP11.81□□□□□ -0.52
SKA1-205ENST00000494518 SULF2Q8IWU5 870 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 CNTN4Q8IWV2 1026 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 CA13Q8N1Q1 262 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 NFAM1Q8NET5 270 aaPredicted RBP11.81□□□□□ -0.52
SKA1-205ENST00000494518 GRK7Q8WTQ7 553 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 CHTF18Q8WVB6 975 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 CCT6BQ92526 530 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 PDLIM2Q96JY6 352 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 DMRTA2Q96SC8 542 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 SARGQ9BW04 601 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 SLC6A16Q9GZN6 736 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 DDX47Q9H0S4 455 aaKnown RBP11.81□□□□□ -0.52
SKA1-205ENST00000494518 LIN28AQ9H9Z2 209 aaKnown RBP11.81□□□□□ -0.52
SKA1-205ENST00000494518 PRDM9Q9NQV7 894 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 PNO1Q9NRX1 252 aaKnown RBP11.81□□□□□ -0.52
SKA1-205ENST00000494518 ZFATQ9P243 1243 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 FBXW2Q9UKT8 454 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 CHMP2BQ9UQN3 213 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 SLC22A14Q9Y267 594 aa11.81□□□□□ -0.52
SKA1-205ENST00000494518 IGKV3D-11A0A0A0MRZ8 115 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 FAM90A27PA6NNH2 459 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 E9PLN8 166 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 CDC7O00311 574 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 FCHO1O14526 889 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 PEX1O43933 1283 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 TTC4O95801 387 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 PTGS2P35354 604 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 AHRP35869 848 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 FNTAP49354 379 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 HLCSP50747 726 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 HNRNPFP52597 415 aaKnown RBP11.8□□□□□ -0.52
SKA1-205ENST00000494518 BTN3A2P78410 334 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 NXPE4Q6UWF7 544 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 MDGA2Q7Z553 956 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 CDH24Q86UP0 819 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.8□□□□□ -0.52
SKA1-205ENST00000494518 CYP4Z2PQ8N1L4 340 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 SLC35F6Q8N357 371 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 RPRMLQ8N4K4 120 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 MARVELD2Q8N4S9 558 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 TMEM156Q8N614 296 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 ARMC2Q8NEN0 867 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 GABPB2Q8TAK5 448 aaPredicted RBP11.8□□□□□ -0.52
SKA1-205ENST00000494518 CA5BP1Q8WTZ4 195 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 ATL1Q8WXF7 558 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 NCLNQ969V3 563 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 OSBPL9Q96SU4 736 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 NAP1L3Q99457 506 aaPredicted RBP11.8□□□□□ -0.52
SKA1-205ENST00000494518 EGFL8Q99944 293 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 VKORC1Q9BQB6 163 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 AIF1LQ9BQI0 150 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 PELI2Q9HAT8 420 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 ZNF223Q9UK11 482 aaPredicted RBP11.8□□□□□ -0.52
SKA1-205ENST00000494518 KLF13Q9Y2Y9 288 aaPredicted RBP11.8□□□□□ -0.52
SKA1-205ENST00000494518 VWA7Q9Y334 891 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 JRKLQ9Y4A0 524 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 HRH3Q9Y5N1 445 aa11.8□□□□□ -0.52
SKA1-205ENST00000494518 NINQ8N4C6 2090 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 GOLGA6L10A0A0M3HER8 536 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 NKX2-6A6NCS4 301 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 TGFBR3LH3BV60 316 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 PRKNO60260 465 aaPredicted RBP11.79□□□□□ -0.52
SKA1-205ENST00000494518 ITGA10O75578 1167 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 SMIM10L1P0DMW3 83 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 TRHRP34981 398 aaPredicted RBP11.79□□□□□ -0.52
SKA1-205ENST00000494518 ELK3P41970 407 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 PPP1R3AQ16821 1122 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 CMPK2Q5EBM0 449 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 FAM45BPQ6NSW5 357 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 KIAA0408Q6ZU52 694 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 STRA8Q7Z7C7 330 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 CLNKQ7Z7G1 428 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 FAM47BQ8NA70 645 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 APCDD1LQ8NCL9 501 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 TMEM52Q8NDY8 209 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 B3GNT7Q8NFL0 401 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 OR52N2Q8NGI0 321 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 FAM45AQ8TCE6 357 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 CREB3L4Q8TEY5 395 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 PHF10Q8WUB8 498 aaKnown RBP11.79□□□□□ -0.52
SKA1-205ENST00000494518 SMIM10Q96HG1 83 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 WDR83Q9BRX9 315 aaKnown RBP11.79□□□□□ -0.52
SKA1-205ENST00000494518 DEFB127Q9H1M4 99 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 COQ3Q9NZJ6 369 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 KCMF1Q9P0J7 381 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 PSAT1Q9Y617 370 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 NCKAP5O14513 1909 aa11.79□□□□□ -0.52
SKA1-205ENST00000494518 A0A0G2JMM0 328 aa11.78□□□□□ -0.52
SKA1-205ENST00000494518 A0A1W2PPB8 328 aa11.78□□□□□ -0.52
SKA1-205ENST00000494518 A0A1W2PRS3 328 aa11.78□□□□□ -0.52
SKA1-205ENST00000494518 PINLYPA6NC86 204 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms