RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 OR6K2Q8NGY2 324 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 SETD6Q8TBK2 473 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 WFDC5Q8TCV5 224 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 BTN2A2Q8WVV5 523 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 PPCDCQ96CD2 204 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 MTFMTQ96DP5 389 aaKnown RBP11.03□□□□□ -0.64
RFC4-214ENST00000494047 NEURL2Q9BR09 285 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 VN1R3Q9BXE9 311 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 CDCA4Q9BXL8 241 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 SLIRPQ9GZT3 109 aaKnown RBP11.03□□□□□ -0.64
RFC4-214ENST00000494047 PCBD2Q9H0N5 130 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 DPEP2Q9H4A9 486 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 SLC6A13Q9NSD5 602 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 TRNAU1APQ9NX07 287 aaKnown RBP11.03□□□□□ -0.64
RFC4-214ENST00000494047 MARK1Q9P0L2 795 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 DPP7Q9UHL4 492 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 TSR3Q9UJK0 312 aaKnown RBP11.03□□□□□ -0.64
RFC4-214ENST00000494047 ICKQ9UPZ9 632 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 HCN4Q9Y3Q4 1203 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 PCDHGA6Q9Y5G7 932 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 HEMK1Q9Y5R4 338 aaPredicted RBP11.03□□□□□ -0.64
RFC4-214ENST00000494047 REV3LO60673 3130 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 SLC5A10A0PJK1 596 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 KRBA1A5PL33 1030 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 TMEM221A6NGB7 291 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 SNTNA6NMZ2 147 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 ARHGEF33A8MVX0 844 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 FADS2P1A8MWK0 482 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 H3BQ06 376 aaPredicted RBP11.03□□□□□ -0.64
RFC4-214ENST00000494047 J3QRK9 145 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 LEFTY2O00292 366 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 PI15O43692 258 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 GPR37L1O60883 481 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 LRATO95237 230 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 FUCA1P04066 466 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 IFNW1P05000 195 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 IDSP22304 550 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 TGM1P22735 817 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 CD70P32970 193 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 TIE1P35590 1138 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 EIF2DP41214 584 aaKnown RBP11.03□□□□□ -0.64
RFC4-214ENST00000494047 RPA4Q13156 261 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 SCARB2Q14108 478 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 GNA13Q14344 377 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 SMAD2Q15796 467 aaKnown RBP11.03□□□□□ -0.64
RFC4-214ENST00000494047 SPANXN2Q5MJ10 180 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 TXNDC8Q6A555 127 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 AHSA2Q719I0 299 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 SLC46A3Q7Z3Q1 461 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 GALNT5Q7Z7M9 940 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 SPNS2Q8IVW8 549 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 BBS7Q8IWZ6 715 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 OR7G3Q8NG95 312 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 PSMA8Q8TAA3 256 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 SPPL2AQ8TCT8 520 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 GLYATL1Q969I3 302 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 SH3KBP1Q96B97 665 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 TPD52L3Q96J77 140 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 MSLNLQ96KJ4 702 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 LINC00615Q96LM1 132 aaPredicted RBP11.03□□□□□ -0.64
RFC4-214ENST00000494047 PIP5K1AQ99755 562 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 C3orf14Q9HBI5 128 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 EXD2Q9NVH0 621 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 CLN6Q9NWW5 311 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 VNN3Q9NY84 501 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 TAS2R9Q9NYW1 312 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 SPATA7Q9P0W8 599 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 TDRKHQ9Y2W6 561 aaKnown RBP11.03□□□□□ -0.64
RFC4-214ENST00000494047 CORINQ9Y5Q5 1042 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 DGKBQ9Y6T7 804 aa11.03□□□□□ -0.64
RFC4-214ENST00000494047 KIF26AQ9ULI4 1882 aaPredicted RBP11.02□□□□□ -0.65
RFC4-214ENST00000494047 A0A075B6Q4 140 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 AGAP5A6NIR3 686 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 METTL15A6NJ78 407 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 HIDE1A8MVS5 230 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 TTC34A8MYJ7 566 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 H3BM21 787 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 hCG_2039718K7EN88 272 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 MBTPS2O43462 519 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 XYLBO75191 536 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 ATP6V1G1O75348 118 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 TNFRSF21O75509 655 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 WBP4O75554 376 aaKnown RBP11.02□□□□□ -0.65
RFC4-214ENST00000494047 RFPL2O75678 378 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 CCNB2O95067 398 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 ARAFP10398 606 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 LAMP1P11279 417 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 UQCRC2P22695 453 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 ITPKAP23677 461 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 TGFBR2P37173 567 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 MASP1P48740 699 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 NEK2P51955 445 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 SPIBQ01892 262 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 NAE1Q13564 534 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 ARHGAP19Q14CB8 494 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 CYP2A13Q16696 494 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 ZNF805Q5CZA5 627 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 ATAD3BQ5T9A4 648 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 KIAA1211LQ6NV74 962 aa11.02□□□□□ -0.65
RFC4-214ENST00000494047 DPY19L3Q6ZPD9 716 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms