RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 C2orf92A0A1B0GVN3 265 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 EIF5BO60841 1220 aaKnown RBP3.33□□□□□ -1.88
ITGB1-216ENST00000493758 ANGPTL1O95841 491 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 SP9P0CG40 484 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 LBPP18428 481 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 NDUFV3P56181 108 aaKnown RBP3.33□□□□□ -1.88
ITGB1-216ENST00000493758 SIX1Q15475 284 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-216ENST00000493758 ZNF542PQ5EBM4 170 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 SEL1L3Q68CR1 1132 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 TMUB2Q71RG4 321 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 METTL23Q86XA0 190 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 CORO2AQ92828 525 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 PRMT1Q99873 361 aaKnown RBP3.33□□□□□ -1.88
ITGB1-216ENST00000493758 ATG101Q9BSB4 218 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 CCM2Q9BSQ5 444 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 TRIM7Q9C029 511 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 GPR173Q9NS66 373 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 SLCO1C1Q9NYB5 712 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 ZNF581Q9P0T4 197 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 SPATA2Q9UM82 520 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 PFASO15067 1338 aa3.33□□□□□ -1.88
ITGB1-216ENST00000493758 A8MU10 97 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 A8MU76 341 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 WDR46O15213 610 aaKnown RBP3.32□□□□□ -1.88
ITGB1-216ENST00000493758 MLNRO43193 412 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 GPRIN2O60269 458 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 SELENOFO60613 162 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 GALR3O60755 368 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-216ENST00000493758 HPP00738 406 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 ADORA3P0DMS8 318 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 SCG2P13521 617 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 SRD5A2P31213 254 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 CNTN1Q12860 1018 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 GPR50Q13585 617 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 POM121L1PQ3SYA9 428 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 ARMCX4Q5H9R4 360 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 C9orf66Q5T8R8 295 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 RNLSQ5VYX0 342 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 SLC27A4Q6P1M0 643 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 TIPARPQ7Z3E1 657 aaKnown RBP3.32□□□□□ -1.88
ITGB1-216ENST00000493758 DZIP1Q86YF9 867 aaKnown RBP3.32□□□□□ -1.88
ITGB1-216ENST00000493758 SUMF1Q8NBK3 374 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 OR6F1Q8NGZ6 308 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 C8orf46Q8TAG6 207 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 NABP1Q96AH0 204 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 MLPHQ9BV36 600 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-216ENST00000493758 RBM24Q9BX46 236 aaKnown RBP3.32□□□□□ -1.88
ITGB1-216ENST00000493758 STRADBQ9C0K7 418 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 ADNPQ9H2P0 1102 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 MRGBPQ9NV56 204 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 KAT6BQ8WYB5 2073 aa3.32□□□□□ -1.88
ITGB1-216ENST00000493758 HCFC1P51610 2035 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 TRIM49BA6NDI0 452 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 YDJCA8MPS7 323 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 RENP00797 406 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 DLATP10515 647 aaKnown RBP3.31□□□□□ -1.88
ITGB1-216ENST00000493758 SCN1BQ07699 218 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 CETN1Q12798 172 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 MAPK11Q15759 364 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 KNOP1Q1ED39 458 aaKnown RBP3.31□□□□□ -1.88
ITGB1-216ENST00000493758 RFTN2Q52LD8 501 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-216ENST00000493758 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.31□□□□□ -1.88
ITGB1-216ENST00000493758 HPS6Q86YV9 775 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 SAP25Q8TEE9 199 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 TAAR6Q96RI8 345 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 DPEP2Q9H4A9 486 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 VIPAS39Q9H9C1 493 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 PDRG1Q9NUG6 133 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 THYN1Q9P016 225 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 GPR132Q9UNW8 380 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 PLCL2Q9UPR0 1127 aa3.31□□□□□ -1.88
ITGB1-216ENST00000493758 ARHGEF37A1IGU5 675 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 ZNF732B4DXR9 585 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 P2RX6O15547 441 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 TXNL1O43396 289 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 SH3BGRLO75368 114 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 CLN5O75503 358 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 ANKRD34CP0C6C1 535 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 GSK3BP49841 420 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 RIDAP52758 137 aaKnown RBP3.3□□□□□ -1.88
ITGB1-216ENST00000493758 EVCP57679 992 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 PSMD6Q15008 389 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 LRRC37A5PQ49AS3 106 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 ZRANB3Q5FWF4 1079 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 ZNF776Q68DI1 518 aaPredicted RBP3.3□□□□□ -1.88
ITGB1-216ENST00000493758 TMED8Q6PL24 325 aaPredicted RBP3.3□□□□□ -1.88
ITGB1-216ENST00000493758 PET117Q6UWS5 81 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 CEACAM19Q7Z692 300 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 GLRX5Q86SX6 157 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 KCNMB4Q86W47 210 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 SIAH3Q8IW03 269 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 OR4N5Q8IXE1 308 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 TDHQ8IZJ6 230 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 DEPDC1BQ8WUY9 529 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 CKAP2Q8WWK9 683 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 GBP5Q96PP8 586 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 NMUR1Q9HB89 426 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 DEPPQ9NTK1 212 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 CLEC5AQ9NY25 188 aa3.3□□□□□ -1.88
ITGB1-216ENST00000493758 STYXL1Q9Y6J8 313 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms