RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 NPHS2Q9NP85 383 aa11.81□□□□□ -0.52
SNX17-208ENST00000493711 LYARQ9NX58 379 aaKnown RBP11.81□□□□□ -0.52
SNX17-208ENST00000493711 PISDQ9UG56 409 aa11.81□□□□□ -0.52
SNX17-208ENST00000493711 EIF3LQ9Y262 564 aaKnown RBP11.81□□□□□ -0.52
SNX17-208ENST00000493711 CCL27Q9Y4X3 112 aa11.81□□□□□ -0.52
SNX17-208ENST00000493711 PCDHGA7Q9Y5G6 932 aa11.81□□□□□ -0.52
SNX17-208ENST00000493711 SDHDO14521 159 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 ZNF195O14628 629 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 LSM1O15116 133 aaKnown RBP11.8□□□□□ -0.52
SNX17-208ENST00000493711 NVLO15381 856 aaKnown RBP11.8□□□□□ -0.52
SNX17-208ENST00000493711 B3GALT2O43825 422 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 GALR3O60755 368 aaPredicted RBP11.8□□□□□ -0.52
SNX17-208ENST00000493711 TBX6O95947 436 aaPredicted RBP11.8□□□□□ -0.52
SNX17-208ENST00000493711 KLK3P07288 261 aaPredicted RBP11.8□□□□□ -0.52
SNX17-208ENST00000493711 CD63P08962 238 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 ZNF888P0CJ79 500 aaPredicted RBP11.8□□□□□ -0.52
SNX17-208ENST00000493711 IL10P22301 178 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 MAPK10P53779 464 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 PLA2G16P53816 162 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 CLDN6P56747 220 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 TRA2BP62995 288 aaKnown RBP11.8□□□□□ -0.52
SNX17-208ENST00000493711 ERVK-8P63133 956 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 BTN3A2P78410 334 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 HMGCS1Q01581 520 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 EMX2Q04743 252 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 TBL3Q12788 808 aaKnown RBP11.8□□□□□ -0.52
SNX17-208ENST00000493711 C3orf38Q5JPI3 329 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 C6orf136Q5SQH8 315 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 METTL21CQ5VZV1 264 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 ADNP2Q6IQ32 1131 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 TTLL10Q6ZVT0 673 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 COMMD6Q7Z4G1 85 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 SPATA21Q7Z572 469 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 C7orf57Q8NEG2 295 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 CLIP3Q96DZ5 547 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 PRR11Q96HE9 360 aaPredicted RBP11.8□□□□□ -0.52
SNX17-208ENST00000493711 HBEGFQ99075 208 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 TCF7L2Q9NQB0 619 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 STARD5Q9NSY2 213 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 MS4A12Q9NXJ0 267 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 ASIC5Q9NY37 505 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 MCM8Q9UJA3 840 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 TRIM33Q9UPN9 1127 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 SATB2Q9UPW6 733 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 MAPRE3Q9UPY8 281 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 SPACA6W5XKT8 324 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 LAMA1P25391 3075 aa11.8□□□□□ -0.52
SNX17-208ENST00000493711 FRYQ5TBA9 3013 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 A0A0G2JND7 137 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 BLACEA4D250 179 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 PLPP1O14494 284 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 PEX11AO75192 247 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 DXOO77932 396 aaKnown RBP11.79□□□□□ -0.52
SNX17-208ENST00000493711 KLHL18O94889 574 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 TNFSF15O95150 251 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 ETHE1O95571 254 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 ONECUT2O95948 504 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 PRR35P0CG20 571 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 PRPS2P11908 318 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 DDX5P17844 614 aaKnown RBP11.79□□□□□ -0.52
SNX17-208ENST00000493711 AGXTP21549 392 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 DRD4P21917 467 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 HIST1H1TP22492 207 aaPredicted RBP11.79□□□□□ -0.52
SNX17-208ENST00000493711 ALAS2P22557 587 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 ATP5A1P25705 553 aaKnown RBP11.79□□□□□ -0.52
SNX17-208ENST00000493711 BSGP35613 385 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 IDH3AP50213 366 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 ARFIP2P53365 341 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 SEC24CP53992 1094 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 RAB8AP61006 207 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 ABHD18Q0P651 414 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 MAP7Q14244 749 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 SLC9A5Q14940 896 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 DEFB134Q4QY38 66 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 CCNYL2Q5T2Q4 361 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 NXNQ6DKJ4 435 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 CYP20A1Q6UW02 462 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 LARP4Q71RC2 724 aaKnown RBP eCLIP11.79□□□□□ -0.52
SNX17-208ENST00000493711 UBE3DQ7Z6J8 389 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 C1orf52Q8N6N3 182 aaKnown RBP11.79□□□□□ -0.52
SNX17-208ENST00000493711 ACOT4Q8N9L9 421 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 FNDC5Q8NAU1 212 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 OR2T11Q8NH01 316 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 ZCCHC10Q8TBK6 192 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 C11orf24Q96F05 449 aaPredicted RBP11.79□□□□□ -0.52
SNX17-208ENST00000493711 C10orf90Q96M02 699 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 C3orf30Q96M34 536 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 MACROD1Q9BQ69 325 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 MRPL1Q9BYD6 325 aaKnown RBP11.79□□□□□ -0.52
SNX17-208ENST00000493711 ULBP3Q9BZM4 244 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 KLHL31Q9H511 634 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 AKTIPQ9H8T0 292 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 SYNPO2LQ9H987 977 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 LYRM4Q9HD34 91 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 PRDM9Q9NQV7 894 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 PRDM7Q9NQW5 492 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 NOP53Q9NZM5 478 aaKnown RBP11.79□□□□□ -0.52
SNX17-208ENST00000493711 NDOR1Q9UHB4 597 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 PHF11Q9UIL8 331 aa11.79□□□□□ -0.52
SNX17-208ENST00000493711 DCTN4Q9UJW0 460 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms