RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CCDC77Q9BR77 488 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 WDR83Q9BRX9 315 aaKnown RBP11.67□□□□□ -0.54
COL6A1-205ENST00000492851 ERP44Q9BS26 406 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 ROGDIQ9GZN7 287 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 ANKRD10Q9NXR5 420 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 IKZF3Q9UKT9 509 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 ZNF835Q9Y2P0 537 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 SNX24Q9Y343 169 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 PSAT1Q9Y617 370 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 POLEQ07864 2286 aa11.67□□□□□ -0.54
COL6A1-205ENST00000492851 MDC1Q14676 2089 aaKnown RBP11.66□□□□□ -0.54
COL6A1-205ENST00000492851 HIVEP3Q5T1R4 2406 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 IGKV3D-11A0A0A0MRZ8 115 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 FAM227AF5H4B4 570 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 TP73O15350 636 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 ASNA1O43681 348 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 DNAJB6O75190 326 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 STK16O75716 305 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 SLC25A12O75746 678 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 S100BP04271 92 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-205ENST00000492851 CCDC166P0CW27 439 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 TPP2P29144 1249 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-205ENST00000492851 RPL21P46778 160 aaKnown RBP11.66□□□□□ -0.54
COL6A1-205ENST00000492851 PGGT1BP53609 377 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 MLF1P58340 268 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 CAV1Q03135 178 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 EFTUD2Q15029 972 aaKnown RBP eCLIP11.66□□□□□ -0.54
COL6A1-205ENST00000492851 Q6ZPB1 254 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-205ENST00000492851 C3orf62Q6ZUJ4 267 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 CEP97Q8IW35 865 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 ZNF595Q8IYB9 648 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 CA13Q8N1Q1 262 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 GHDCQ8N2G8 530 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 OR2L5Q8NG80 312 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 ANKRD49Q8WVL7 239 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 ITLN2Q8WWU7 325 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-205ENST00000492851 UBE2E3Q969T4 207 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 KIAA1191Q96A73 305 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 MS4A6EQ96DS6 147 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 PTCD3Q96EY7 689 aaKnown RBP11.66□□□□□ -0.54
COL6A1-205ENST00000492851 CCDC120Q96HB5 630 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 SERINC2Q96SA4 455 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 MCMBPQ9BTE3 642 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 EFCAB11Q9BUY7 163 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 REXO4Q9GZR2 422 aaKnown RBP11.66□□□□□ -0.54
COL6A1-205ENST00000492851 SPNS1Q9H2V7 528 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 RHBGQ9H310 441 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 KLHL31Q9H511 634 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 PRTFDC1Q9NRG1 225 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 DNAJC11Q9NVH1 559 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 WWOXQ9NZC7 414 aa11.66□□□□□ -0.54
COL6A1-205ENST00000492851 PPIEQ9UNP9 301 aaKnown RBP11.66□□□□□ -0.54
COL6A1-205ENST00000492851 KLF13Q9Y2Y9 288 aaPredicted RBP11.66□□□□□ -0.54
COL6A1-205ENST00000492851 NPIPA5E9PKD4 350 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 PRRG2O14669 202 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 ERI3O43414 337 aaKnown RBP11.65□□□□□ -0.54
COL6A1-205ENST00000492851 NME2P1O60361 137 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 ZFAND5O76080 213 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 B3GALT4O96024 378 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 MAOAP21397 527 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 NME2P22392 152 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 SPRP35270 261 aaPredicted RBP11.65□□□□□ -0.54
COL6A1-205ENST00000492851 PTGER4P35408 488 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 GP5P40197 560 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 GDF5P43026 501 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 PMP22Q01453 160 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 SLC13A2Q13183 592 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 SLBPQ14493 270 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL6A1-205ENST00000492851 ZNF460Q14592 562 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 FASTKD3Q14CZ7 662 aaKnown RBP11.65□□□□□ -0.54
COL6A1-205ENST00000492851 ZNF630Q2M218 657 aaPredicted RBP11.65□□□□□ -0.54
COL6A1-205ENST00000492851 ADPRMQ3LIE5 342 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 GRTP1Q5TC63 336 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.65□□□□□ -0.54
COL6A1-205ENST00000492851 GPALPP1Q8IXQ4 340 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 SHISA5Q8N114 240 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 TMEM132CQ8N3T6 1108 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 TMEM156Q8N614 296 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 NFAM1Q8NET5 270 aaPredicted RBP11.65□□□□□ -0.54
COL6A1-205ENST00000492851 STAG3L4Q8TBR4 150 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 CCT6BQ92526 530 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 VMP1Q96GC9 406 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 FRMD6Q96NE9 622 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 PHACTR1Q9C0D0 580 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 COPS7BQ9H9Q2 264 aaPredicted RBP11.65□□□□□ -0.54
COL6A1-205ENST00000492851 NECTIN3Q9NQS3 549 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 NPIPA1Q9UND3 350 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 MTO1Q9Y2Z2 717 aaKnown RBP11.65□□□□□ -0.54
COL6A1-205ENST00000492851 UTP11Q9Y3A2 253 aaKnown RBP11.65□□□□□ -0.54
COL6A1-205ENST00000492851 SPACA6W5XKT8 324 aa11.65□□□□□ -0.54
COL6A1-205ENST00000492851 ARHGAP10A1A4S6 786 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 CCDC189A1A4V9 331 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 NCF1BA6NI72 391 aaPredicted RBP11.64□□□□□ -0.55
COL6A1-205ENST00000492851 USP27XA6NNY8 438 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 NCF1CA8MVU1 366 aaPredicted RBP11.64□□□□□ -0.55
COL6A1-205ENST00000492851 MAN1A2O60476 641 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 CTNSO60931 367 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 MYO1DO94832 1006 aa11.64□□□□□ -0.55
COL6A1-205ENST00000492851 NCF1P14598 390 aaPredicted RBP11.64□□□□□ -0.55
COL6A1-205ENST00000492851 ABOP16442 354 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms