RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 GAL3ST3Q96A11 431 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 RBBP8Q99708 897 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 TMEM79Q9BSE2 394 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 LRFN1Q9P244 771 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 COPG2Q9UBF2 871 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 APCP25054 2843 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 IGKV3D-11A0A0A0MRZ8 115 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 TCRBV9S1A1TA0A576 114 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 ARHGAP10A1A4S6 786 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 PRSS44E7EML9 344 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 NEURL1O76050 574 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 SP1P08047 785 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 CD1DP15813 335 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 STMN1P16949 149 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 TPP2P29144 1249 aaPredicted RBP16.15■□□□□ 0.18
SGMS1-204ENST00000492601 GMPRP36959 345 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 HSPA7P48741 367 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 ALDH6A1Q02252 535 aaKnown RBP16.15■□□□□ 0.18
SGMS1-204ENST00000492601 RBPJQ06330 500 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 RUNX2Q13950 521 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 ADNP2Q6IQ32 1131 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 MAATS1Q7Z4T9 603 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.15■□□□□ 0.18
SGMS1-204ENST00000492601 CTAGE3PQ8IX95 158 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 LGI4Q8N135 537 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 KRT78Q8N1N4 520 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 HORMAD2Q8N7B1 307 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 SNX31Q8N9S9 440 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 NFAM1Q8NET5 270 aaPredicted RBP16.15■□□□□ 0.18
SGMS1-204ENST00000492601 EXT2Q93063 718 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 MS4A6EQ96DS6 147 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 CCDC120Q96HB5 630 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 GPR22Q99680 433 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 CPNE1Q99829 537 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 DNAJC11Q9NVH1 559 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 GRHL1Q9NZI5 618 aa16.15■□□□□ 0.18
SGMS1-204ENST00000492601 SUCOQ9UBS9 1254 aaKnown RBP16.15■□□□□ 0.18
SGMS1-204ENST00000492601 LRIT2A6NDA9 550 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 FAM159BA6NKW6 160 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 NPIPA5E9PKD4 350 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 CLGNO14967 610 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 EIF3HO15372 352 aaKnown RBP eCLIP16.14■□□□□ 0.17
SGMS1-204ENST00000492601 PRAMEF4O60810 478 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 SLC25A12O75746 678 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 CA7P43166 264 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 PLA2G16P53816 162 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 MLF1P58340 268 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 GPX6P59796 221 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 ILF2Q12905 390 aaKnown RBP16.14■□□□□ 0.17
SGMS1-204ENST00000492601 MAPKAPK3Q16644 382 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 PRAMEF9Q5VWM5 478 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 SLC25A25Q6KCM7 469 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 C3orf62Q6ZUJ4 267 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 VN1R5Q7Z5H4 357 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 CCDC25Q86WR0 208 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 TCAIMQ8N3R3 496 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 TTLQ8NG68 377 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 THAP3Q8WTV1 239 aaPredicted RBP16.14■□□□□ 0.17
SGMS1-204ENST00000492601 ITLN2Q8WWU7 325 aaPredicted RBP16.14■□□□□ 0.17
SGMS1-204ENST00000492601 FRMD6Q96NE9 622 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 CAPS2Q9BXY5 557 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 DEFB126Q9BYW3 111 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 CNOT10Q9H9A5 744 aaKnown RBP16.14■□□□□ 0.17
SGMS1-204ENST00000492601 PNO1Q9NRX1 252 aaKnown RBP16.14■□□□□ 0.17
SGMS1-204ENST00000492601 GPRC5BQ9NZH0 403 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 CD274Q9NZQ7 290 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 NPIPA1Q9UND3 350 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 CSMD1Q96PZ7 3565 aa16.14■□□□□ 0.17
SGMS1-204ENST00000492601 TRBV11-1A0A0K0K1C0 115 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 ASPDHA6ND91 283 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 ANKDD1BA6NHY2 528 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 TGFBR3LH3BV60 316 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 B3GALT2O43825 422 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 SLC19A2O60779 497 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 CLEC3AO75596 197 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 STK16O75716 305 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 FAM155BO75949 473 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 MYO1DO94832 1006 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 PPP2R1BP30154 601 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 GGT5P36269 586 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 GP5P40197 560 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 CYB561P49447 251 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 HNRNPFP52597 415 aaKnown RBP16.13■□□□□ 0.17
SGMS1-204ENST00000492601 PLTPP55058 493 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 C3AR1Q16581 482 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 XKR6Q5GH73 641 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 SP5Q6BEB4 398 aaPredicted RBP16.13■□□□□ 0.17
SGMS1-204ENST00000492601 SULT1C3Q6IMI6 304 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 C17orf53Q8N3J3 647 aaPredicted RBP16.13■□□□□ 0.17
SGMS1-204ENST00000492601 FAM47BQ8NA70 645 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 FAM98AQ8NCA5 519 aaKnown RBP16.13■□□□□ 0.17
SGMS1-204ENST00000492601 TMEM52Q8NDY8 209 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 MARVELD3Q96A59 401 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 GPR137Q96N19 417 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 QRFPRQ96P65 431 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 NT5DC2Q9H857 520 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 PRTFDC1Q9NRG1 225 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 TINAGQ9UJW2 476 aa16.13■□□□□ 0.17
SGMS1-204ENST00000492601 ZNF490Q9ULM2 529 aaPredicted RBP16.13■□□□□ 0.17
SGMS1-204ENST00000492601 MMACHCQ9Y4U1 282 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms