RNA–Protein interactions for RNA: ENST00000489633.1

NEK2-204, Transcript of NIMA related kinase 2, humanhuman

TSL 2

Gene NEK2, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-204ENST00000489633 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.39□□□□□ -2.03
NEK2-204ENST00000489633 N4BP2L1Q5TBK1 243 aaPredicted RBP2.39□□□□□ -2.03
NEK2-204ENST00000489633 FAM91A1Q658Y4 838 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 TMEM198Q66K66 360 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 TMEM211Q6ICI0 200 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 PRR27Q6MZM9 219 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 CASC4Q6P4E1 433 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 CORO6Q6QEF8 472 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 ZBTB49Q6ZSB9 765 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 SPATA19Q7Z5L4 167 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 ABI3BPQ7Z7G0 1075 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 CLYBLQ8N0X4 340 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 NDUFAF2Q8N183 169 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 FBXO39Q8N4B4 442 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 KBTBD8Q8NFY9 601 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 OR2T11Q8NH01 316 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 RNF128Q8TEB7 428 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 DNASE1L2Q92874 299 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 ZNF558Q96NG5 402 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 ZNF582Q96NG8 517 aaPredicted RBP2.39□□□□□ -2.03
NEK2-204ENST00000489633 ABHD6Q9BV23 337 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 FUT8Q9BYC5 575 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 GPR88Q9GZN0 384 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 SLA2Q9H6Q3 261 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 CNOT10Q9H9A5 744 aaKnown RBP2.39□□□□□ -2.03
NEK2-204ENST00000489633 PAG1Q9NWQ8 432 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 TMEM161AQ9NX61 479 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 NPAP1Q9NZP6 1156 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 TBC1D7Q9P0N9 293 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 TXNDC16Q9P2K2 825 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 ZDHHC2Q9UIJ5 367 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 MOSPD1Q9UJG1 213 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 MOB4Q9Y3A3 225 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.39□□□□□ -2.031e-10■□□□□ 8.5
NEK2-204ENST00000489633 SNX5Q9Y5X3 404 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 LIPGQ9Y5X9 500 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 MTCH2Q9Y6C9 303 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 CEP162Q5TB80 1403 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 LY75O60449 1722 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 C4BP0C0L5 1744 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 CDC42BPAQ5VT25 1732 aa2.39□□□□□ -2.03
NEK2-204ENST00000489633 TLN1Q9Y490 2541 aaKnown RBP2.38□□□□□ -2.03
NEK2-204ENST00000489633 KANK1Q14678 1352 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 CCDC7Q96M83 1385 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 A0A0U1RQK1 487 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 C13orf42A0A1B0GVH6 325 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 ZNF320A2RRD8 509 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 ANKUB1A6NFN9 424 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 URADA6NGE7 173 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 LRRC37A2A6NM11 1700 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 YDJCA8MPS7 323 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 E9PI62 339 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 DDX39AO00148 427 aaKnown RBP2.38□□□□□ -2.03
NEK2-204ENST00000489633 TO15178 435 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 HTATSF1O43719 755 aaKnown RBP2.38□□□□□ -2.03
NEK2-204ENST00000489633 TADA2AO75478 443 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 ZWINTO95229 277 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 PGLSO95336 258 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 TGDSO95455 350 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 CLDN1O95832 211 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 PENKP01210 267 aaPredicted RBP2.38□□□□□ -2.03
NEK2-204ENST00000489633 RLN1P04808 185 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 PDGFRAP16234 1089 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 EPORP19235 508 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 IL10P22301 178 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 ACAT1P24752 427 aaKnown RBP2.38□□□□□ -2.03
NEK2-204ENST00000489633 GMPSP49915 693 aaPredicted RBP2.38□□□□□ -2.03
NEK2-204ENST00000489633 PDX1P52945 283 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 PRMT2P55345 433 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 FKBP1BP68106 108 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 PRKAA1Q13131 559 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 PEX6Q13608 980 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 CUL3Q13618 768 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 SLMAPQ14BN4 828 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 E2F5Q15329 346 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 MEP1BQ16820 701 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 VWC2Q2TAL6 325 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 ANKRD20A4Q4UJ75 823 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 PDLIM3Q53GG5 364 aaPredicted RBP2.38□□□□□ -2.03
NEK2-204ENST00000489633 ANKRD20A8PQ5CZ79 823 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 NHSL2Q5HYW2 709 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 LRRC73Q5JTD7 316 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 ANKRD20A2Q5SQ80 823 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 WLSQ5T9L3 541 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 C6orf163Q5TEZ5 329 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 ANKRD20A1Q5TYW2 823 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 ANKRD20A3Q5VUR7 823 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 C11orf63Q6NUN7 778 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 MFSD12Q6NUT3 480 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 CAVIN1Q6NZI2 390 aaKnown RBP2.38□□□□□ -2.03
NEK2-204ENST00000489633 ZNF343Q6P1L6 599 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 PPP1R21Q6ZMI0 780 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 GPRIN3Q6ZVF9 776 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 TLK2Q86UE8 772 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 HOOK3Q86VS8 718 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 AMIGO1Q86WK6 493 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 SNX32Q86XE0 403 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 SIAH3Q8IW03 269 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 C11orf53Q8IXP5 236 aa2.38□□□□□ -2.03
NEK2-204ENST00000489633 RAB42Q8N4Z0 105 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms