RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 CAPN13Q6MZZ7 669 aaPredicted RBP8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 RPUSD3Q6P087 351 aaKnown RBP8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 TTC27Q6P3X3 843 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 GALNT18Q6P9A2 607 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 IGFL2Q6UWQ7 119 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 LINC00696Q6ZRV3 163 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 DENND6AQ8IWF6 608 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 CPNE9Q8IYJ1 553 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 BCORP1Q8N888 145 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 NAT8LQ8N9F0 302 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 ST6GALNAC3Q8NDV1 305 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 TMEM52Q8NDY8 209 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 OR1N1Q8NGS0 311 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 KCNC2Q96PR1 638 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 AARSD1Q9BTE6 412 aaKnown RBP8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 TUBB6Q9BUF5 446 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 PARVBQ9HBI1 364 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 AP5S1Q9NUS5 200 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 KLHL14Q9P2G3 628 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 ICE1Q9Y2F5 2266 aa8.37□□□□□ -1.07
TNRC6B-208ENST00000489500 SPTBN1Q01082 2364 aaKnown RBP8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 SVILO95425 2214 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 A0A0A6YYC8 382 aaPredicted RBP8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 H7BY64 318 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 I3L1I5 382 aaPredicted RBP8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 DNALI1O14645 258 aaPredicted RBP8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 TRIM13O60858 407 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 HAUS5O94927 633 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 NSA2O95478 260 aaKnown RBP8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 C8orf89P0DMQ9 161 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 PAFAH1B1P43034 410 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 AP1S2P56377 157 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 RBPJQ06330 500 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 ACTN3Q08043 901 aaPredicted RBP8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 CRYMQ14894 314 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 HKDC1Q2TB90 917 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 MINDY4Q4G0A6 757 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 PRR30Q53SZ7 412 aaPredicted RBP8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 ATG9BQ674R7 924 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 ZNF425Q6IV72 752 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 FAM45BPQ6NSW5 357 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 MAMDC2Q7Z304 686 aaPredicted RBP8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 CUZD1Q86UP6 607 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 SLC35F6Q8N357 371 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 PPFIBP2Q8ND30 876 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 FAM45AQ8TCE6 357 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 CD200R1Q8TD46 325 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 FAR1Q8WVX9 515 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 HAS2Q92819 552 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 LRRC39Q96DD0 335 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 C19orf60Q96EN9 201 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 MS4A14Q96JA4 679 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 ZNF354BQ96LW1 612 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 MAGEB10Q96LZ2 347 aaPredicted RBP8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 C10orf90Q96M02 699 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 PRAP1Q96NZ9 151 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 OR2A5Q96R48 311 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 PTGFRNQ9P2B2 879 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 GALPQ9UBC7 116 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 SNX12Q9UMY4 172 aa8.36□□□□□ -1.07
TNRC6B-208ENST00000489500 CPAMD8Q8IZJ3 1885 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 IGHV1-45A0A0A0MS14 117 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 HAT1O14929 419 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 SHOXO15266 292 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 ALOX12BO75342 701 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 ENO2P09104 434 aaPredicted RBP8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 PRR35P0CG20 571 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 PRKCAP17252 672 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 JAK1P23458 1154 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 IMPA1P29218 277 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 MAGEA3P43357 314 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 CCR8P51685 355 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 SLC12A2P55011 1212 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 CASP6P55212 293 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 ARL4CP56559 192 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 TAS2R50P59544 299 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 TBPL1P62380 186 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 MPP1Q00013 466 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 MEF2AQ02078 507 aaPredicted RBP8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 EEF1A2Q05639 463 aaKnown RBP8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 RGS1Q08116 209 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 CSHL1Q14406 222 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 MORF4L2Q15014 288 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 HERC3Q15034 1050 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 EXT1Q16394 746 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 RNASEH2BQ5TBB1 312 aaKnown RBP8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 DUPD1Q68J44 220 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 FAAH2Q6GMR7 532 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 AGTRAPQ6RW13 159 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 LCTLQ6UWM7 567 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 CYHR1Q6ZMK1 362 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 PIWIL4Q7Z3Z4 852 aaKnown RBP8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 GALNT7Q86SF2 657 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 ASPGQ86U10 573 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 HORMAD2Q8N7B1 307 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 BBOF1Q8ND07 529 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 GRHL3Q8TE85 626 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 EEF1AKMT1Q8WVE0 214 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 SLC13A3Q8WWT9 602 aa8.35□□□□□ -1.07
TNRC6B-208ENST00000489500 DACT3Q96B18 629 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms