RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 MIPP30301 263 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 FLT3P36888 993 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 PCYT1AP49585 367 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 VPS41P49754 854 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 SULT1E1P49888 294 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 HLCSP50747 726 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 CDH6P55285 790 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 YBEYP58557 167 aaPredicted RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 SLC25A11Q02978 314 aaKnown RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 ZNF844Q08AG5 666 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 SCGB2A2Q13296 93 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 TRIP13Q15645 432 aaPredicted RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 UAP1Q16222 522 aaPredicted RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 NRF1Q16656 503 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 CDO1Q16878 200 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 P3H1Q32P28 736 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 PARP15Q460N3 678 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 TTMPQ5BVD1 217 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 DNAJC21Q5F1R6 531 aaKnown RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 SCYL2Q6P3W7 929 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 OLFML1Q6UWY5 402 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 ZDHHC24Q6UX98 284 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 RHOUQ7L0Q8 258 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 ARCQ7LC44 396 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 SLC22A16Q86VW1 577 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 VSIG1Q86XK7 387 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 M1APQ8TC57 530 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 C10orf105Q8TEF2 133 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 LCN9Q8WX39 176 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 RAPGEF5Q92565 580 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 P3H4Q92791 437 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 UBE2FQ969M7 185 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 ARL8AQ96BM9 186 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 HAUS1Q96CS2 278 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 HSPBAP1Q96EW2 488 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 C12orf66Q96MD2 445 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 TTC25Q96NG3 672 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 SMIM14Q96QK8 99 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 FERMT1Q9BQL6 677 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 TTTY12Q9BZ98 90 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 TXLNGYQ9BZA5 131 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 ROPN1BQ9BZX4 212 aaPredicted RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 CDCP1Q9H5V8 836 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 CNOT10Q9H9A5 744 aaKnown RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 ROPN1Q9HAT0 212 aaPredicted RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 PCDH9Q9HC56 1237 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 ESM1Q9NQ30 184 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 C14orf105Q9NVL8 296 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 R3HDM2Q9Y2K5 976 aaKnown RBP6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 PCDHGB5Q9Y5G0 923 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 STARD9Q9P2P6 4700 aa6.88□□□□□ -1.31
EXOSC3-206ENST00000489414 TLDC2A0PJX2 215 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 ERICH4A6NGS2 130 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 ZNF487B1APH4 448 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM72CH0Y354 149 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 DNALI1O14645 258 aaPredicted RBP6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 APOL1O14791 398 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 RIPK2O43353 540 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 PRAMEF11O60813 436 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 ZNF189O75820 626 aaPredicted RBP6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 PGLSO95336 258 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 AGTP01019 485 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 IFNB1P01574 187 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 CELA3AP09093 270 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 C8orf89P0DMQ9 161 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 TCF4P15884 667 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 TPSB2P20231 275 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 NDUFS1P28331 727 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 STIP1P31948 543 aaKnown RBP6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 CCKARP32238 428 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 HPDP32754 393 aaPredicted RBP6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 MAGEA5P43359 124 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 PTPN9P43378 593 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 EIF3EP60228 445 aaKnown RBP6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 DYNLT1P63172 113 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 GNGT1P63211 74 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 ATP11AP98196 1134 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 PLGLB1Q02325 96 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 PCDH1Q08174 1060 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM27E3Q08E93 113 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 TRAF2Q12933 501 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 GPS1Q13098 491 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 SLC29A2Q14542 456 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 GRM7Q14831 915 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 MORF4L2Q15014 288 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 TPSAB1Q15661 275 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 EXT1Q16394 746 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 CCDC14Q49A88 953 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 KHDC1Q4VXA5 237 aaKnown RBP6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM72AQ5TYM5 149 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM72DQ6L9T8 149 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 PLXDC2Q6UX71 529 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 C4orf22Q6V702 233 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 SLC26A9Q7LBE3 791 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 MDGA2Q7Z553 956 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 RPS19BP1Q86WX3 136 aaKnown RBP6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM72BQ86X60 149 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 ADGRF3Q8IZF5 1079 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM109AQ8N4B1 249 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 ZNF525Q8N782 197 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms