RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 KIRREL3Q8IZU9 778 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 GBP7Q8N8V2 638 aaPredicted RBP11.79□□□□□ -0.52
COL4A5-206ENST00000489230 OR51Q1Q8NH59 317 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 ADAMTS18Q8TE60 1221 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 STARD8Q92502 1023 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 QRFPRQ96P65 431 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 CDK15Q96Q40 435 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 OR1F2PQ96R84 312 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 SERINC2Q96SA4 455 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 MTERF1Q99551 399 aaKnown RBP11.79□□□□□ -0.52
COL4A5-206ENST00000489230 GATA5Q9BWX5 397 aaPredicted RBP11.79□□□□□ -0.52
COL4A5-206ENST00000489230 MS4A8Q9BY19 250 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 C12orf65Q9H3J6 166 aaKnown RBP11.79□□□□□ -0.52
COL4A5-206ENST00000489230 GSTO2Q9H4Y5 243 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 KLHL31Q9H511 634 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 ACTL8Q9H568 366 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 COPS7BQ9H9Q2 264 aaPredicted RBP11.79□□□□□ -0.52
COL4A5-206ENST00000489230 BRF2Q9HAW0 419 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 MID1IP1Q9NPA3 183 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 PFDN4Q9NQP4 134 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 SEMA3GQ9NS98 782 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 SLC22A11Q9NSA0 550 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 IL17BQ9UHF5 180 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 PTRH2Q9Y3E5 179 aaKnown RBP11.79□□□□□ -0.52
COL4A5-206ENST00000489230 SPACA6W5XKT8 324 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 SDK2Q58EX2 2172 aa11.79□□□□□ -0.52
COL4A5-206ENST00000489230 SEC16AO15027 2179 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 SERTM1A2A2V5 107 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 HMGB1P1B2RPK0 211 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-206ENST00000489230 B8ZZF3 427 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 SGK494L7N484 410 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 PSMD12O00232 456 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-206ENST00000489230 ATP8B1O43520 1251 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 KLF7O75840 302 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-206ENST00000489230 OR4F21O95013 312 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 MED26O95402 600 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 CHEK2O96017 543 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 STATHP02808 62 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 FGF4P08620 206 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 ZGLP1P0C6A0 271 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 UROSP10746 265 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 IL1RNP18510 177 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 TSPAN8P19075 237 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 JAK1P23458 1154 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 F8A1P23610 371 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 NEK2P51955 445 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 RAP1GDS1P52306 607 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 PLA2G16P53816 162 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 MTTPP55157 894 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 RAB8AP61006 207 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 KCNC4Q03721 635 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 DDX39BQ13838 428 aaKnown RBP11.78□□□□□ -0.52
COL4A5-206ENST00000489230 LY6DQ14210 128 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 UGT8Q16880 541 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 OR4C11Q6IEV9 310 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 LETMD1Q6P1Q0 360 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 FAM198BQ6UWH4 519 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 MED25Q71SY5 747 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 PAGE2Q7Z2X7 111 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 VN1R5Q7Z5H4 357 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 RAB43Q86YS6 212 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 TRIM42Q8IWZ5 723 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 CDYL2Q8N8U2 506 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 ZCCHC10Q8TBK6 192 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 STT3BQ8TCJ2 826 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 SELENOMQ8WWX9 145 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 MTFMTQ96DP5 389 aaKnown RBP11.78□□□□□ -0.52
COL4A5-206ENST00000489230 RNF31Q96EP0 1072 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 ATP6V1G3Q96LB4 118 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 F2RL3Q96RI0 385 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 SH3GL2Q99962 352 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 DMRT3Q9NQL9 472 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 SPTBP11277 2137 aa11.78□□□□□ -0.52
COL4A5-206ENST00000489230 COL6A6A6NMZ7 2263 aa11.77□□□□□ -0.52
COL4A5-206ENST00000489230 UQCRHLA0A096LP55 91 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 TMEM120BA0PK00 339 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 BLACEA4D250 179 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 SYNDIG1LA6NDD5 238 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 MAGEB17A8MXT2 336 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 MANBAO00462 879 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 PEX12O00623 359 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 PPP6CO00743 305 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 CLDN4O14493 209 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 CHST10O43529 356 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 SEMA3DO95025 777 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 BMP10O95393 424 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 HEXBP07686 556 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 UQCRHP07919 91 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 DHRS4L1P0CG22 281 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 RNH1P13489 461 aaKnown RBP11.77□□□□□ -0.53
COL4A5-206ENST00000489230 MMP11P24347 488 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 HNRNPH1P31943 449 aaKnown RBP11.77□□□□□ -0.53
COL4A5-206ENST00000489230 EMP2P54851 167 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 RPS13P62277 151 aaKnown RBP11.77□□□□□ -0.53
COL4A5-206ENST00000489230 ERV3-1Q14264 604 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 RPS27LQ71UM5 84 aaKnown RBP11.77□□□□□ -0.53
COL4A5-206ENST00000489230 PDSS2Q86YH6 399 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 CLYBLQ8N0X4 340 aa11.77□□□□□ -0.53
COL4A5-206ENST00000489230 METTL27Q8N6F8 245 aaPredicted RBP11.77□□□□□ -0.53
COL4A5-206ENST00000489230 AMER3Q8N944 861 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms