RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 SPTBN1Q01082 2364 aaKnown RBP13.16□□□□□ -0.3
VTI1A-206ENST00000489142 MYOCOSA0A1B0GUC4 107 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 OR5H15A6NDH6 313 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 ANKDD1BA6NHY2 528 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 KERAO60938 352 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 ACSL3O95573 720 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 GP1BBP13224 206 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 IL10P22301 178 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 CERS1P27544 350 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 CRABP2P29373 138 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 HNRNPFP52597 415 aaKnown RBP13.15□□□□□ -0.3
VTI1A-206ENST00000489142 SLC26A5P58743 744 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 AP2B1P63010 937 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 CHIT1Q13231 466 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 NAB1Q13506 487 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 EXT1Q16394 746 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 ACER2Q5QJU3 275 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 QSOX2Q6ZRP7 698 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 CENPLQ8N0S6 344 aaPredicted RBP13.15□□□□□ -0.3
VTI1A-206ENST00000489142 FAM47BQ8NA70 645 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 ST6GALNAC3Q8NDV1 305 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 TMEM52Q8NDY8 209 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 M1APQ8TC57 530 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 IFT81Q8WYA0 676 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 PTCD3Q96EY7 689 aaKnown RBP13.15□□□□□ -0.3
VTI1A-206ENST00000489142 SIGLEC12Q96PQ1 595 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 F2RL3Q96RI0 385 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 ATOH8Q96SQ7 321 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 HES7Q9BYE0 225 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 CD244Q9BZW8 370 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 REXO4Q9GZR2 422 aaKnown RBP13.15□□□□□ -0.3
VTI1A-206ENST00000489142 NMRAL1Q9HBL8 299 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 MMP25Q9NPA2 562 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 SNX15Q9NRS6 342 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 OLAHQ9NV23 265 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 NUDT4Q9NZJ9 180 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 TEKT2Q9UIF3 430 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 OSGIN2Q9Y236 505 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 CROCCQ5TZA2 2017 aa13.15□□□□□ -0.3
VTI1A-206ENST00000489142 IGKV3D-11A0A0A0MRZ8 115 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 LRRC14BA6NHZ5 514 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 TGFBR3LH3BV60 316 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 PCNAP12004 261 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 PPP2R1BP30154 601 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 MSH2P43246 934 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 KCNK10P57789 538 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 IRF8Q02556 426 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 TUBA3CQ13748 450 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 CDKL4Q5MAI5 379 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 NIPAL1Q6NVV3 410 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 H3F3CQ6NXT2 135 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 TUBA3EQ6PEY2 450 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 CLNKQ7Z7G1 428 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 RNF175Q8N4F7 328 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 BCORP1Q8N888 145 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 TTLQ8NG68 377 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 STAG3L4Q8TBR4 150 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 SREK1Q8WXA9 508 aaKnown RBP13.14□□□□□ -0.31
VTI1A-206ENST00000489142 ZNF354BQ96LW1 612 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 QRFPRQ96P65 431 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 CSF3RQ99062 836 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 CAPS2Q9BXY5 557 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 RNF32Q9H0A6 362 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 EHD1Q9H4M9 534 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 PRDM9Q9NQV7 894 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 KLHL1Q9NR64 748 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 COPG2Q9UBF2 871 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 ACOT9Q9Y305 439 aa13.14□□□□□ -0.31
VTI1A-206ENST00000489142 TCRBV16S1A1N1A0A5B0 115 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 SAGE2PA6NJ88 616 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 GABRR3A8MPY1 467 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 B3GALT2O43825 422 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 PRAMEF2O60811 474 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 CLEC3AO75596 197 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 WISP2O76076 250 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 C2P06681 752 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 EDN3P14138 238 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 MST1P26927 711 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 CD96P40200 585 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 MEP1AQ16819 746 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 ZNF766Q5HY98 468 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 SPINK14Q6IE38 97 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 RPUSD3Q6P087 351 aaKnown RBP13.13□□□□□ -0.31
VTI1A-206ENST00000489142 TRIM40Q6P9F5 258 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 LRRC70Q7Z2Q7 622 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 MMGT1Q8N4V1 131 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 OR2L5Q8NG80 312 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 SUN3Q8TAQ9 357 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 UHMK1Q8TAS1 419 aaKnown RBP13.13□□□□□ -0.31
VTI1A-206ENST00000489142 WDR34Q96EX3 536 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 SLX1AQ9BQ83 275 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 CDC42EP4Q9H3Q1 356 aaKnown RBP13.13□□□□□ -0.31
VTI1A-206ENST00000489142 CDCP1Q9H5V8 836 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 NT5DC2Q9H857 520 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 PNO1Q9NRX1 252 aaKnown RBP13.13□□□□□ -0.31
VTI1A-206ENST00000489142 OPTCQ9UBM4 332 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 PLEKHB1Q9UF11 243 aaPredicted RBP13.13□□□□□ -0.31
VTI1A-206ENST00000489142 SLC5A6Q9Y289 635 aa13.13□□□□□ -0.31
VTI1A-206ENST00000489142 NBPF19A0A087WUL8 3843 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 A0A087X1B8 175 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms