RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 SERPINB10P48595 397 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 RGS4P49798 205 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 GP2P55259 537 aaKnown RBP7.35□□□□□ -1.23
BEST3-205ENST00000488961 CYP4F3Q08477 520 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 MADCAM1Q13477 382 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 DGCR6Q14129 220 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 NFE2L1Q14494 772 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 DPY19L1Q2PZI1 675 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 LEXMQ3ZCV2 418 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 CYBRD1Q53TN4 286 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 XKR6Q5GH73 641 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 CES5AQ6NT32 575 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 DCAF4L2Q8NA75 395 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 PCNPQ8WW12 178 aaKnown RBP7.35□□□□□ -1.23
BEST3-205ENST00000488961 ROPN1LQ96C74 230 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 RNF31Q96EP0 1072 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 MYRFLQ96LU7 910 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 ZNF382Q96SR6 550 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 SECISBP2Q96T21 854 aaKnown RBP7.35□□□□□ -1.23
BEST3-205ENST00000488961 UHRF1Q96T88 793 aaPredicted RBP7.35□□□□□ -1.23
BEST3-205ENST00000488961 ING2Q9H160 280 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 ASAH2Q9NR71 780 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 PLSCR2Q9NRY7 297 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 RAPGEFL1Q9UHV5 662 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 PCOLCE2Q9UKZ9 415 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 DENND4CQ5VZ89 1909 aa7.35□□□□□ -1.23
BEST3-205ENST00000488961 FAM234BA2RU67 622 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 RTCAO00442 366 aaKnown RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 PITPNM1O00562 1244 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 EEDO75530 441 aaKnown RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 OTCP00480 354 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 HTR1AP08908 422 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 XPAP23025 273 aaPredicted RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 KELP23276 732 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 DGKAP23743 735 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 CTNNB1P35222 781 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 RFC2P35250 354 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 RPS9P46781 194 aaKnown RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 CSNK1DP48730 415 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 BTN1A1Q13410 526 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 GALEQ14376 348 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 CDKN3Q16667 212 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 ZNF181Q2M3W8 571 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 ZNF852Q6ZMS4 543 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 HORMAD1Q86X24 394 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 TMC8Q8IU68 726 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 MINDY1Q8N5J2 469 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 TRPV3Q8NET8 790 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 DEDD2Q8WXF8 326 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 RIT1Q92963 219 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 PHOX2BQ99453 314 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 HOPXQ9BPY8 73 aaPredicted RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 TSEN34Q9BSV6 310 aaKnown RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 SAV1Q9H4B6 383 aaPredicted RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 ZNF224Q9NZL3 707 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 SH3BP4Q9P0V3 963 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 ABCD2Q9UBJ2 740 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 TNFRSF10DQ9UBN6 386 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 NUFIP1Q9UHK0 495 aaKnown RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 ABCG2Q9UNQ0 655 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 ZNF175Q9Y473 711 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 LRRK1Q38SD2 2015 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 URB1O60287 2271 aaKnown RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 CACNA1CQ13936 2221 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 TP53BP1Q12888 1972 aaPredicted RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 FRYQ5TBA9 3013 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 TRAV19A0A0A6YYK7 116 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 PRAMEF33A0A0G2JMD5 474 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 TFECO14948 347 aaPredicted RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 ANKRD28O15084 1053 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 TSC22D2O75157 780 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 TGFB1P01137 390 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 FTH1P02794 183 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 RETP07949 1114 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 ALPPL2P10696 532 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 MSH3P20585 1137 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 RPL35P42766 123 aaKnown RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 GNPDA1P46926 289 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 PRIM2P49643 509 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 RNF144AP50876 292 aaPredicted RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 RPS26P62854 115 aaKnown RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 CNTN1Q12860 1018 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 RAB33AQ14088 237 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 TMEM31Q5JXX7 168 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 LIPIQ6XZB0 460 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 Q6ZNB5 142 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 SZRD1Q7Z422 152 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 MEX3DQ86XN8 651 aaKnown RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 TRAPPC5Q8IUR0 188 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 CFAP206Q8IYR0 622 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 MICU2Q8IYU8 434 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 OR2A12Q8NGT7 310 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 MCFD2Q8NI22 146 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 FAR1Q8WVX9 515 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 STON2Q8WXE9 905 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 ARSGQ96EG1 525 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 CENPNQ96H22 339 aaPredicted RBP7.34□□□□□ -1.23
BEST3-205ENST00000488961 CEP19Q96LK0 163 aa7.34□□□□□ -1.23
BEST3-205ENST00000488961 TMEM175Q9BSA9 504 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms