RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SLC22A14Q9Y267 594 aa17.22■□□□□ 0.35
HDAC6-231ENST00000488905 NPEPPSL1A6NEC2 478 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 PRRG2O14669 202 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 TFECO14948 347 aaPredicted RBP17.21■□□□□ 0.35
HDAC6-231ENST00000488905 SERPINA6P08185 405 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 SSTR2P30874 369 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 PTGER1P34995 402 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 MEOX1P50221 254 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 RBBP5Q15291 538 aaKnown RBP17.21■□□□□ 0.35
HDAC6-231ENST00000488905 TOR1AIP1Q5JTV8 583 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 HP1BP3Q5SSJ5 553 aaPredicted RBP17.21■□□□□ 0.35
HDAC6-231ENST00000488905 C3P1Q6ZMU1 363 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 EID3Q8N140 333 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 PDIK1LQ8N165 341 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 B3GNT7Q8NFL0 401 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 CREB3L4Q8TEY5 395 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 DMRTA2Q96SC8 542 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 ZFATQ9P243 1243 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 KLF13Q9Y2Y9 288 aaPredicted RBP17.21■□□□□ 0.35
HDAC6-231ENST00000488905 MMACHCQ9Y4U1 282 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 KCNE2Q9Y6J6 123 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 MED13LQ71F56 2210 aa17.21■□□□□ 0.35
HDAC6-231ENST00000488905 ZFHX3Q15911 3703 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 TRBV11-1A0A0K0K1C0 115 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 A8MUA0 341 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 CDC7O00311 574 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 ADAM10O14672 748 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 MYO1DO94832 1006 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 IVDP26440 423 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 KIR3DL1P43629 444 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 CLCN2P51788 898 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 CDKL1Q00532 357 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 MORF4L2Q15014 288 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 TERF2Q15554 542 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 SCUBE1Q8IWY4 988 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.2■□□□□ 0.34
HDAC6-231ENST00000488905 CYP4Z2PQ8N1L4 340 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 GAL3ST3Q96A11 431 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 PDLIM2Q96JY6 352 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 PWWP2AQ96N64 755 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 EGFL8Q99944 293 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 PSAT1Q9Y617 370 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 TEX264Q9Y6I9 313 aa17.2■□□□□ 0.34
HDAC6-231ENST00000488905 SAT1P21673 171 aa17.19■□□□□ 0.34
HDAC6-231ENST00000488905 RFC3P40938 356 aa17.19■□□□□ 0.34
HDAC6-231ENST00000488905 HNMTP50135 292 aa17.19■□□□□ 0.34
HDAC6-231ENST00000488905 STXBP1P61764 594 aaKnown RBP17.19■□□□□ 0.34
HDAC6-231ENST00000488905 ZNF460Q14592 562 aa17.19■□□□□ 0.34
HDAC6-231ENST00000488905 CD163Q86VB7 1156 aa17.19■□□□□ 0.34
HDAC6-231ENST00000488905 CEP97Q8IW35 865 aa17.19■□□□□ 0.34
HDAC6-231ENST00000488905 SULF2Q8IWU5 870 aa17.19■□□□□ 0.34
HDAC6-231ENST00000488905 NKAPQ8N5F7 415 aaKnown RBP17.19■□□□□ 0.34
HDAC6-231ENST00000488905 ANKRD7Q92527 254 aa17.19■□□□□ 0.34
HDAC6-231ENST00000488905 LRRC39Q96DD0 335 aa17.19■□□□□ 0.34
HDAC6-231ENST00000488905 ZNF223Q9UK11 482 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-231ENST00000488905 PPT2Q9UMR5 302 aa17.19■□□□□ 0.34
HDAC6-231ENST00000488905 OARD1Q9Y530 152 aa17.19■□□□□ 0.34
HDAC6-231ENST00000488905 FAM95CA0A1B0GW59 222 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 KLRC4-KLRK1H3BQV0 150 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 ITGA10O75578 1167 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 BTN3A2P78410 334 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 FRG1Q14331 258 aaKnown RBP17.18■□□□□ 0.34
HDAC6-231ENST00000488905 FRA10AC1Q70Z53 315 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 ADAMTSL2Q86TH1 951 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 ZC3HC1Q86WB0 502 aaKnown RBP17.18■□□□□ 0.34
HDAC6-231ENST00000488905 TMEM156Q8N614 296 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 TTLQ8NG68 377 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 FAM57AQ8TBR7 257 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 CA5BP1Q8WTZ4 195 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 SDCCAG3Q96C92 435 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 C14orf79Q96F83 325 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 VMP1Q96GC9 406 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 FAR2Q96K12 515 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 SPOCK3Q9BQ16 436 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 FBXW2Q9UKT8 454 aa17.18■□□□□ 0.34
HDAC6-231ENST00000488905 PPIEQ9UNP9 301 aaKnown RBP17.18■□□□□ 0.34
HDAC6-231ENST00000488905 A0A0G2JN53 185 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 ERI3O43414 337 aaKnown RBP17.17■□□□□ 0.34
HDAC6-231ENST00000488905 HS6ST1O60243 411 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 WDR47O94967 919 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 GNAZP19086 355 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 TFEBP19484 476 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 GSTM2P28161 218 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 HNRNPH1P31943 449 aaKnown RBP17.17■□□□□ 0.34
HDAC6-231ENST00000488905 PTGS2P35354 604 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 SLC6A12P48065 614 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 RAB38P57729 211 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 SLBPQ14493 270 aaKnown RBP eCLIP17.17■□□□□ 0.34
HDAC6-231ENST00000488905 TSNQ15631 228 aaKnown RBP17.17■□□□□ 0.34
HDAC6-231ENST00000488905 CMPK2Q5EBM0 449 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 KLHDC8AQ8IYD2 350 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 ACBD4Q8NC06 268 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 C16orf52Q8NHV5 167 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 NCLNQ969V3 563 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 NPLQ9BXD5 320 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-231ENST00000488905 PNO1Q9NRX1 252 aaKnown RBP17.17■□□□□ 0.34
HDAC6-231ENST00000488905 COQ3Q9NZJ6 369 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 CLDN16Q9Y5I7 305 aa17.17■□□□□ 0.34
HDAC6-231ENST00000488905 A0A1B0GTH9 108 aa17.16■□□□□ 0.34
HDAC6-231ENST00000488905 TGFBR3LH3BV60 316 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms