RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 RHEBL1Q8TAI7 183 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 M1APQ8TC57 530 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 GRHL3Q8TE85 626 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 GAL3ST3Q96A11 431 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 FAR2Q96K12 515 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 PTCHD1Q96NR3 888 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 FMO2Q99518 471 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 EFCAB11Q9BUY7 163 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 REXO4Q9GZR2 422 aaKnown RBP10.76□□□□□ -0.69
SPEN-205ENST00000487496 RNF32Q9H0A6 362 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 RHBGQ9H310 441 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 MMP25Q9NPA2 562 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 SNX15Q9NRS6 342 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 TEKT2Q9UIF3 430 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 ESPL1Q14674 2120 aa10.76□□□□□ -0.69
SPEN-205ENST00000487496 PTPN13Q12923 2485 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 IGKV3D-11A0A0A0MRZ8 115 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 TRAV17A0A0B4J275 112 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 OR5H15A6NDH6 313 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 ANKUB1A6NFN9 424 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 K7EPI3 171 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 SEMA7AO75326 666 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 AGFG2O95081 481 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 KLHL2O95198 593 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 ACSL3O95573 720 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 ALDOAP04075 364 aaKnown RBP10.75□□□□□ -0.69
SPEN-205ENST00000487496 MAOAP21397 527 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 TYK2P29597 1187 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 CASP2P42575 452 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 PLA2G16P53816 162 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 SLC26A5P58743 744 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 IRF8Q02556 426 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 LAPTM5Q13571 262 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 E2F2Q14209 437 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 ACAP2Q15057 778 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 HIST2H2ACQ16777 129 aaPredicted RBP10.75□□□□□ -0.69
SPEN-205ENST00000487496 FAM83EQ2M2I3 478 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 ADPRMQ3LIE5 342 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 PAGE2BQ5JRK9 111 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 ACER2Q5QJU3 275 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 FCRLBQ6BAA4 426 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 HIST2H2AA3Q6FI13 130 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 H3F3CQ6NXT2 135 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 PRR7Q8TB68 274 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 UBTD2Q8WUN7 234 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 FAR1Q8WVX9 515 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 SLC44A1Q8WWI5 657 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 ZNF354BQ96LW1 612 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 MAGEB10Q96LZ2 347 aaPredicted RBP10.75□□□□□ -0.69
SPEN-205ENST00000487496 QRFPRQ96P65 431 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 GPR78Q96P69 363 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 PSMG3-AS1Q96PY0 264 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 NPLQ9BXD5 320 aaPredicted RBP10.75□□□□□ -0.69
SPEN-205ENST00000487496 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.75□□□□□ -0.69
SPEN-205ENST00000487496 KCNK13Q9HB14 408 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 NECTIN3Q9NQS3 549 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 PRDM9Q9NQV7 894 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 OPTCQ9UBM4 332 aa10.75□□□□□ -0.69
SPEN-205ENST00000487496 TCRBV16S1A1N1A0A5B0 115 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 CCDC189A1A4V9 331 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 BLACEA4D250 179 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 SYCE1LA8MT33 242 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 B3GALT2O43825 422 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 HPDP32754 393 aaPredicted RBP10.74□□□□□ -0.69
SPEN-205ENST00000487496 SERPINB8P50452 374 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 PCDH1Q08174 1060 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 TRIM40Q6P9F5 258 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 ABHD17CQ6PCB6 329 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 FAM180AQ6UWF9 173 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 CRLF3Q8IUI8 442 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 CYP4X1Q8N118 509 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 BEST3Q8N1M1 668 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 ST6GALNAC3Q8NDV1 305 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 KIF18AQ8NI77 898 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 ELP5Q8TE02 316 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 UBE2E3Q969T4 207 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 F2RL3Q96RI0 385 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 TAAR6Q96RI8 345 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 NPAS2Q99743 824 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 PRDM7Q9NQW5 492 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 MMACHCQ9Y4U1 282 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 USP9XQ93008 2570 aaPredicted RBP10.74□□□□□ -0.69
SPEN-205ENST00000487496 SCN2AQ99250 2005 aa10.74□□□□□ -0.69
SPEN-205ENST00000487496 A0A088AWK7 358 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 E2F3O00716 465 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 KLK8O60259 260 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 MAN1A2O60476 641 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 ABCB7O75027 752 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 INHBAP08476 426 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 GFAPP14136 432 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 EDN3P14138 238 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 EPB42P16452 691 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 ZNF10P21506 573 aaPredicted RBP10.73□□□□□ -0.69
SPEN-205ENST00000487496 MSH2P43246 934 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 MAGEA12P43365 314 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 MTTPP55157 894 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 RAB38P57729 211 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 TGM3Q08188 693 aa10.73□□□□□ -0.69
SPEN-205ENST00000487496 ELOAQ14241 798 aaKnown RBP10.73□□□□□ -0.69
SPEN-205ENST00000487496 NAA30Q147X3 362 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms