RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 SULT1C3Q6IMI6 304 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 C3orf62Q6ZUJ4 267 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 GALNTL5Q7Z4T8 443 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.66□□□□□ -0.54
SREBF1-215ENST00000487401 SPATA4Q8NEY3 305 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 GAL3ST3Q96A11 431 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 TMEM125Q96AQ2 219 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 SEC16BQ96JE7 1060 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 MAGED4Q96JG8 741 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 MCMBPQ9BTE3 642 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 NPLQ9BXD5 320 aaPredicted RBP11.66□□□□□ -0.54
SREBF1-215ENST00000487401 PITHD1Q9GZP4 211 aaPredicted RBP11.66□□□□□ -0.54
SREBF1-215ENST00000487401 RUBCNLQ9H714 662 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 NT5DC2Q9H857 520 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 CAB39LQ9H9S4 337 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 NECTIN3Q9NQS3 549 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 PNO1Q9NRX1 252 aaKnown RBP11.66□□□□□ -0.54
SREBF1-215ENST00000487401 DNAJC11Q9NVH1 559 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 MMACHCQ9Y4U1 282 aa11.66□□□□□ -0.54
SREBF1-215ENST00000487401 A0A0G2JN53 185 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 LRIT2A6NDA9 550 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 NPIPA5E9PKD4 350 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 FCHO1O14526 889 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 PHGDHO43175 533 aaKnown RBP11.65□□□□□ -0.54
SREBF1-215ENST00000487401 CLEC3AO75596 197 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 STK16O75716 305 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 SLC25A12O75746 678 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 NEURL1O76050 574 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 MYO1DO94832 1006 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 GP5P40197 560 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 HSPA7P48741 367 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 HLCSP50747 726 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 PLA2G16P53816 162 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 MLF1P58340 268 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 TGM3Q08188 693 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 RCN2Q14257 317 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 HIST2H2ACQ16777 129 aaPredicted RBP11.65□□□□□ -0.54
SREBF1-215ENST00000487401 XKR6Q5GH73 641 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 HIST2H2AA3Q6FI13 130 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 RPTNQ6XPR3 784 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 CYS1Q717R9 158 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 MRGPRGQ86SM5 289 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 CTAGE3PQ8IX95 158 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 THAP3Q8WTV1 239 aaPredicted RBP11.65□□□□□ -0.54
SREBF1-215ENST00000487401 MARVELD3Q96A59 401 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 MS4A6EQ96DS6 147 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 CCDC120Q96HB5 630 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 GPR137Q96N19 417 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 REXO4Q9GZR2 422 aaKnown RBP11.65□□□□□ -0.54
SREBF1-215ENST00000487401 AICDAQ9GZX7 198 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 TSPAN10Q9H1Z9 355 aaPredicted RBP11.65□□□□□ -0.54
SREBF1-215ENST00000487401 PRTFDC1Q9NRG1 225 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 CD274Q9NZQ7 290 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 FBXW2Q9UKT8 454 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 RNF112Q9ULX5 631 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 NPIPA1Q9UND3 350 aa11.65□□□□□ -0.54
SREBF1-215ENST00000487401 MRPS33Q9Y291 106 aaKnown RBP11.65□□□□□ -0.54
SREBF1-215ENST00000487401 UTP11Q9Y3A2 253 aaKnown RBP11.65□□□□□ -0.54
SREBF1-215ENST00000487401 IGKV3D-11A0A0A0MRZ8 115 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 TRBV11-1A0A0K0K1C0 115 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 TCRBV9S1A1TA0A576 114 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 ASPDHA6ND91 283 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 FAM159BA6NKW6 160 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 C4orf51C9J302 202 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 TAPBPO15533 448 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 RAD51CO43502 376 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 SNRNP200O75643 2136 aaKnown RBP11.64□□□□□ -0.55
SREBF1-215ENST00000487401 WISP2O76076 250 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 GSTA2P09210 222 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 CD1DP15813 335 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 CASQ1P31415 396 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 HNRNPH1P31943 449 aaKnown RBP11.64□□□□□ -0.55
SREBF1-215ENST00000487401 TRHRP34981 398 aaPredicted RBP11.64□□□□□ -0.55
SREBF1-215ENST00000487401 SPRP35270 261 aaPredicted RBP11.64□□□□□ -0.55
SREBF1-215ENST00000487401 GGT5P36269 586 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 CLCN2P51788 898 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 PLTPP55058 493 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 HSD17B7P56937 341 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 RAB10P61026 200 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 CAV1Q03135 178 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 SLC13A2Q13183 592 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 LAPTM5Q13571 262 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 RUNX2Q13950 521 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 NAA30Q147X3 362 aaPredicted RBP11.64□□□□□ -0.55
SREBF1-215ENST00000487401 C3AR1Q16581 482 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 PDK4Q16654 411 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 FBXO48Q5FWF7 155 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 PAGE2BQ5JRK9 111 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 GRTP1Q5TC63 336 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 ZNF468Q5VIY5 522 aaPredicted RBP11.64□□□□□ -0.55
SREBF1-215ENST00000487401 TRIM40Q6P9F5 258 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 RAPH1Q70E73 1250 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 CCDC25Q86WR0 208 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 SPPL2CQ8IUH8 684 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 ZNF808Q8N4W9 903 aaPredicted RBP11.64□□□□□ -0.55
SREBF1-215ENST00000487401 NFAM1Q8NET5 270 aaPredicted RBP11.64□□□□□ -0.55
SREBF1-215ENST00000487401 B3GNT7Q8NFL0 401 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 OR2L5Q8NG80 312 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 ADAMTS18Q8TE60 1221 aa11.64□□□□□ -0.55
SREBF1-215ENST00000487401 ITLN2Q8WWU7 325 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms