RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 EPS8L2Q9H6S3 715 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 PCDHGA6Q9Y5G7 932 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 PCDHGA12O60330 932 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 TNFRSF21O75509 655 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 FCHO2Q0JRZ9 810 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 TSTA3Q13630 321 aaPredicted RBP25.02■■□□□ 1.6
HLA-C-208ENST00000487245 SMN1Q16637 294 aaKnown RBP25.02■■□□□ 1.6
HLA-C-208ENST00000487245 CCDC80Q76M96 950 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 NAGSQ8N159 534 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 SMARCD2Q92925 531 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 MTERF3Q96E29 417 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 ASB16Q96NS5 453 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 HDAC8Q9BY41 377 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 GIN1Q9NXP7 522 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 LYVE1Q9Y5Y7 322 aa25.02■■□□□ 1.6
HLA-C-208ENST00000487245 PRRC2BQ5JSZ5 2229 aaKnown RBP25.01■■□□□ 1.59
HLA-C-208ENST00000487245 SH3BGRLO75368 114 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 KELP23276 732 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 PSMB9P28065 219 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 GGT2P36268 569 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 MESP2Q0VG99 397 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 ATP1A4Q13733 1029 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 PDE7AQ13946 482 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 PDGFRLQ15198 375 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.01■■□□□ 1.59
HLA-C-208ENST00000487245 COMMD6Q7Z4G1 85 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 ZNF547Q8IVP9 402 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 OR52N2Q8NGI0 321 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 OR6Q1Q8NGQ2 317 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 NDNFQ8TB73 568 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 RAD51AP1Q96B01 352 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 TMEM106CQ9BVX2 250 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 ZDHHC5Q9C0B5 715 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 MTIF3Q9H2K0 278 aaKnown RBP25.01■■□□□ 1.59
HLA-C-208ENST00000487245 MYNNQ9NPC7 610 aa25.01■■□□□ 1.59
HLA-C-208ENST00000487245 NUP214P35658 2090 aaPredicted RBP25.01■■□□□ 1.59
HLA-C-208ENST00000487245 MUC22E2RYF6 1773 aaPredicted RBP25■■□□□ 1.59
HLA-C-208ENST00000487245 HEPACAM2A8MVW5 462 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 FADS2O95864 444 aaKnown RBP25■■□□□ 1.59
HLA-C-208ENST00000487245 PORP16435 677 aaPredicted RBP25■■□□□ 1.59
HLA-C-208ENST00000487245 RRM2P31350 389 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 TGFBR2P37173 567 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 RELAQ04206 551 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 OXA1LQ15070 435 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 LCTLQ6UWM7 567 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 ADAMTSL4Q6UY14 1074 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 METTL4Q8N3J2 472 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 MFSD4AQ8N468 514 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 OR4C15Q8NGM1 316 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 SUSD6Q92537 303 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 MYOCQ99972 504 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 TMEM38AQ9H6F2 299 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 RUBCNLQ9H714 662 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 THSD1Q9NS62 852 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 OBP2AQ9NY56 170 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 NDUFAF4Q9P032 175 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 MAN1A2O60476 641 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 NADKO95544 446 aaPredicted RBP25■■□□□ 1.59
HLA-C-208ENST00000487245 IMPDH2P12268 514 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 PSMD7P51665 324 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 ZNF385BQ569K4 471 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 EGFLAMQ63HQ2 1017 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 CCDC81Q6ZN84 652 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 ZFYVE19Q96K21 471 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 ALPK1Q96QP1 1244 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 BTBD2Q9BX70 525 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 FKBP14Q9NWM8 211 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 RNF6Q9Y252 685 aa25■■□□□ 1.59
HLA-C-208ENST00000487245 ANXA8P13928 327 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 IFI44LQ53G44 452 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 GCNT6Q5T4J0 391 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 ARMCX6Q7L4S7 300 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 KRT78Q8N1N4 520 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 DNAJC5GQ8N7S2 189 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 C16orf78Q8WTQ4 265 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 COX14Q96I36 57 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 RHNO1Q9BSD3 238 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 OR52A5Q9H2C5 316 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 GPATCH2Q9NW75 528 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 SH2B3Q9UQQ2 575 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 PMF1-BGLAPU3KQ54 211 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 PCM1Q15154 2024 aa24.99■■□□□ 1.59
HLA-C-208ENST00000487245 DENND4AQ7Z401 1863 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 TNFRSF11BO00300 401 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 GPR37L1O60883 481 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 FURINP09958 794 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 NFE2L1Q14494 772 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 PRAMEF14Q5SWL7 426 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 PRAMEF13Q5VWM6 474 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 FAM71E1Q6IPT2 247 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 PDZD3Q86UT5 571 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 DNASE1L2Q92874 299 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 SLC38A4Q969I6 547 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 MAL2Q969L2 176 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 PPCDCQ96CD2 204 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 SAMD11Q96NU1 681 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 PSD2Q9BQI7 771 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 PSORS1C1Q9UIG5 152 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 POFUT2Q9Y2G5 429 aa24.98■■□□□ 1.59
HLA-C-208ENST00000487245 PLK4O00444 970 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms