RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 GABREP78334 506 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 RAE1P78406 368 aaKnown RBP12.13□□□□□ -0.47
HDAC6-229ENST00000486665 IL11RAQ14626 422 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 GRM7Q14831 915 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 KIAA0040Q15053 153 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 TUBB8Q3ZCM7 444 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 TMEM35AQ53FP2 167 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 SPDYAQ5MJ70 313 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 TLDC1Q6P9B6 456 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 LARP4Q71RC2 724 aaKnown RBP eCLIP12.13□□□□□ -0.47
HDAC6-229ENST00000486665 PRSS41Q7RTY9 318 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 BPHLQ86WA6 291 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-229ENST00000486665 PPP1R3BQ86XI6 285 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 HOMEZQ8IX15 550 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 GPR135Q8IZ08 494 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 SHISA5Q8N114 240 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 METTL4Q8N3J2 472 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 TTC29Q8NA56 475 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-229ENST00000486665 SLC38A9Q8NBW4 561 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 OR2L5Q8NG80 312 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 OR8K5Q8NH50 307 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 WDR36Q8NI36 951 aaKnown RBP12.13□□□□□ -0.47
HDAC6-229ENST00000486665 RGMAQ96B86 450 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 TUBGCP3Q96CW5 907 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 MAELQ96JY0 434 aaKnown RBP12.13□□□□□ -0.47
HDAC6-229ENST00000486665 QRFPRQ96P65 431 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 CCT7Q99832 543 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 ELAC2Q9BQ52 826 aaKnown RBP12.13□□□□□ -0.47
HDAC6-229ENST00000486665 C17orf62Q9BQA9 187 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 ZNF717Q9BY31 904 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-229ENST00000486665 NLNQ9BYT8 704 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 TRIM55Q9BYV6 548 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 LRTM1Q9HBL6 345 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 ASCL3Q9NQ33 180 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 SATB2Q9UPW6 733 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 MYO18BQ8IUG5 2567 aa12.13□□□□□ -0.47
HDAC6-229ENST00000486665 COL6A6A6NMZ7 2263 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 TEX51A0A1B0GUA7 166 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 NPIPB8E9PQR5 432 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 FOXS1O43638 330 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 EEDO75530 441 aaKnown RBP12.12□□□□□ -0.47
HDAC6-229ENST00000486665 RSL1D1O76021 490 aaKnown RBP12.12□□□□□ -0.47
HDAC6-229ENST00000486665 SEMA3DO95025 777 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 NTRK1P04629 796 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 JMJD7P0C870 316 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 PRR35P0CG20 571 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 TROVE2P10155 538 aaKnown RBP eCLIP12.12□□□□□ -0.47
HDAC6-229ENST00000486665 ZNF28P17035 718 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 ALOX12P18054 663 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 BSGP35613 385 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 EMP3P54852 163 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 BTN3A2P78410 334 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 EIF3IQ13347 325 aaKnown RBP12.12□□□□□ -0.47
HDAC6-229ENST00000486665 NR6A1Q15406 480 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 AP5B1Q2VPB7 878 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 GALNTL6Q49A17 601 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.12□□□□□ -0.47
HDAC6-229ENST00000486665 RFTN2Q52LD8 501 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-229ENST00000486665 C3orf38Q5JPI3 329 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 C6orf136Q5SQH8 315 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 GARNL3Q5VVW2 1013 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 OR4C11Q6IEV9 310 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 ZNF793Q6ZN11 406 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 TTLL10Q6ZVT0 673 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 CPLX4Q7Z7G2 160 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 PDSS2Q86YH6 399 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 METTL27Q8N6F8 245 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-229ENST00000486665 C1orf52Q8N6N3 182 aaKnown RBP12.12□□□□□ -0.47
HDAC6-229ENST00000486665 ACTRT2Q8TDY3 377 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 GAL3ST3Q96A11 431 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 TEFMQ96QE5 360 aaKnown RBP12.12□□□□□ -0.47
HDAC6-229ENST00000486665 TAAR9Q96RI9 348 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 CCT8L2Q96SF2 557 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 PFDN4Q9NQP4 134 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 CUTCQ9NTM9 273 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 RIC8BQ9NVN3 520 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 NMRK1Q9NWW6 199 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 C1orf109Q9NX04 203 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 DHCR7Q9UBM7 475 aaKnown RBP12.12□□□□□ -0.47
HDAC6-229ENST00000486665 B3GALT1Q9Y5Z6 326 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 SLC22A7Q9Y694 548 aa12.12□□□□□ -0.47
HDAC6-229ENST00000486665 MDC1Q14676 2089 aaKnown RBP12.12□□□□□ -0.47
HDAC6-229ENST00000486665 A0A0A6YYC8 382 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-229ENST00000486665 A0A0G2JND7 137 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 C9orf172C9J069 976 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 PYCARD-AS1I3L0S3 204 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 I3L1I5 382 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-229ENST00000486665 SGK494L7N484 410 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 SEC22BO75396 215 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 SCRG1O75711 98 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 GBAP04062 536 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 KLK1P06870 262 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 IL1RNP18510 177 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 ALAS2P22557 587 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 ATP5A1P25705 553 aaKnown RBP12.11□□□□□ -0.47
HDAC6-229ENST00000486665 RAP1GDS1P52306 607 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 ARFIP2P53365 341 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 PCBP4P57723 403 aaKnown RBP12.11□□□□□ -0.47
HDAC6-229ENST00000486665 NDUFA9Q16795 377 aa12.11□□□□□ -0.47
HDAC6-229ENST00000486665 FAM214AQ32MH5 1076 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms