RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 KANK2Q63ZY3 851 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 ZNF385CQ66K41 422 aaPredicted RBP10.8□□□□□ -0.68
NUP50-216ENST00000486184 PRSS41Q7RTY9 318 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 PAGE2Q7Z2X7 111 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 NUDT13Q86X67 352 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 DTX1Q86Y01 620 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 OR6Y1Q8NGX8 325 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.8□□□□□ -0.68
NUP50-216ENST00000486184 FKBP10Q96AY3 582 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 SERINC2Q96SA4 455 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 HBEGFQ99075 208 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 GPR87Q9BY21 358 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 MKKSQ9NPJ1 570 aaPredicted RBP10.8□□□□□ -0.68
NUP50-216ENST00000486184 THAP1Q9NVV9 213 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 HCN3Q9P1Z3 774 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 CROTQ9UKG9 612 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 NXT1Q9UKK6 140 aaKnown RBP10.8□□□□□ -0.68
NUP50-216ENST00000486184 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.8□□□□□ -0.68
NUP50-216ENST00000486184 RAP2CQ9Y3L5 183 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 MAP4K5Q9Y4K4 846 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 SPACA6W5XKT8 324 aa10.8□□□□□ -0.68
NUP50-216ENST00000486184 SPEGQ15772 3267 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 LOC101059948A0A1B0GTJ6 334 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 SLC28A1O00337 649 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 KLF11O14901 512 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 RGS14O43566 566 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 ITM2AO43736 263 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 SKAP2O75563 359 aaPredicted RBP10.79□□□□□ -0.68
NUP50-216ENST00000486184 SEMA3DO95025 777 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 ALBP02768 609 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 FGF4P08620 206 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 RAB40ALP0C0E4 278 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 ITGAXP20702 1163 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 SERPINB3P29508 390 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 EIF2S3P41091 472 aaKnown RBP10.79□□□□□ -0.68
NUP50-216ENST00000486184 FOLR3P41439 243 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 HTR6P50406 440 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 RPL14P50914 215 aaKnown RBP10.79□□□□□ -0.68
NUP50-216ENST00000486184 ARFIP1P53367 373 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 NCF4Q15080 339 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 SPDYAQ5MJ70 313 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 OR4C11Q6IEV9 310 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 ABHD17CQ6PCB6 329 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 CYP20A1Q6UW02 462 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 SCIMPQ6UWF3 145 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 FAM198BQ6UWH4 519 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 OVCH1Q7RTY7 1134 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 VASH2Q86V25 355 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 PDSS2Q86YH6 399 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 ARHGEF39Q8N4T4 335 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 DTWD1Q8N5C7 304 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 ZNF781Q8N8C0 355 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 ENDOVQ8N8Q3 282 aaKnown RBP10.79□□□□□ -0.68
NUP50-216ENST00000486184 ZSCAN1Q8NBB4 408 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 FAM76AQ8TAV0 307 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 TWIST2Q8WVJ9 160 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 ZNF75CPQ92670 426 aaPredicted RBP10.79□□□□□ -0.68
NUP50-216ENST00000486184 MIEF2Q96C03 454 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 QRFPRQ96P65 431 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 NPLQ9BXD5 320 aaPredicted RBP10.79□□□□□ -0.68
NUP50-216ENST00000486184 FAM117AQ9C073 453 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 CLK4Q9HAZ1 481 aaKnown RBP10.79□□□□□ -0.68
NUP50-216ENST00000486184 C14orf105Q9NVL8 296 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 VPS29Q9UBQ0 182 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 RAXQ9Y2V3 346 aa10.79□□□□□ -0.68
NUP50-216ENST00000486184 SEC16AO15027 2179 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 TMEM233B4DJY2 109 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 C4orf51C9J302 202 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 RTCAO00442 366 aaKnown RBP10.78□□□□□ -0.68
NUP50-216ENST00000486184 PLPP1O14494 284 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 MYO1DO94832 1006 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 ETHE1O95571 254 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 B3GALT4O96024 378 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 SMIM10L1P0DMW3 83 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 RNH1P13489 461 aaKnown RBP10.78□□□□□ -0.68
NUP50-216ENST00000486184 LIFP15018 202 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 IL10P22301 178 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 HIST1H1TP22492 207 aaPredicted RBP10.78□□□□□ -0.68
NUP50-216ENST00000486184 JAK1P23458 1154 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 CERS1P27544 350 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 PTPN4P29074 926 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 XCR1P46094 333 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 OLR1P78380 273 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 MAT1AQ00266 395 aaKnown RBP10.78□□□□□ -0.68
NUP50-216ENST00000486184 BTKQ06187 659 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 ACSM2AQ08AH3 577 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 NR6A1Q15406 480 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 SYT16Q17RD7 645 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 SPIN4Q56A73 249 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 ACSM2BQ68CK6 577 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 LCN10Q6JVE6 187 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 ZNF517Q6ZMY9 492 aaPredicted RBP10.78□□□□□ -0.68
NUP50-216ENST00000486184 PROSER1Q86XN7 944 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 CRLF3Q8IUI8 442 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 AMER3Q8N944 861 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 OR51Q1Q8NH59 317 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 ADAMTS18Q8TE60 1221 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 SMIM10Q96HG1 83 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 MAGEB18Q96M61 343 aa10.78□□□□□ -0.68
NUP50-216ENST00000486184 CCNL2Q96S94 520 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms