RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 SBK1Q52WX2 424 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 TCTE1Q5JU00 501 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 SPOUT1Q5T280 376 aaKnown RBP3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 BSPRYQ5W0U4 402 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 IL27RAQ6UWB1 636 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 LACC1Q8IV20 430 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 ARHGAP24Q8N264 748 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 C17orf53Q8N3J3 647 aaPredicted RBP3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 NIPA2Q8N8Q9 360 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 MRPL43Q8N983 215 aaKnown RBP3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 CHURC1Q8WUH1 139 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 PHLDA1Q8WV24 401 aaPredicted RBP3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 CCDC107Q8WV48 283 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 CDRT15Q96T59 188 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 BOLA2Q9H3K6 86 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 PRMT8Q9NR22 394 aaPredicted RBP3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 SPHK1Q9NYA1 384 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 CACNG4Q9UBN1 327 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 GRID1Q9ULK0 1009 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 STX8Q9UNK0 236 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 WDR37Q9Y2I8 494 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 BAZ2BQ9UIF8 2168 aaKnown RBP3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 MYO9AB2RTY4 2548 aa3.94□□□□□ -1.78
SMARCC1-207ENST00000485833 ATMQ13315 3056 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 SPTAN1Q13813 2472 aaKnown RBP3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 FSD2A1L4K1 749 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 ANKRD61A6NGH8 418 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 E9PQ18 207 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 OR2T7P0C7T2 308 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 TRIM49P0CI25 452 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 TRIM49CP0CI26 452 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 TSPY3P0CV98 308 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 TSPY8P0CW00 308 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 IGHV4-31P0DP07 118 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 CA8P35219 290 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 HOXD13P35453 343 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 NAP1L1P55209 391 aaKnown RBP3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 DSCR10P59022 87 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 KRTAP10-3P60369 221 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 MRPS6P82932 125 aaKnown RBP3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 HTR4Q13639 388 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 PTPN14Q15678 1187 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 ZNF528Q3MIS6 628 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 ALDH1L2Q3SY69 923 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 KLHL26Q53HC5 615 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 ELFN2Q5R3F8 820 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 TCEAL6Q6IPX3 200 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 TEX38Q6PEX7 206 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 DCLRE1AQ6PJP8 1040 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 FIP1L1Q6UN15 594 aaKnown RBP3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 ADIPOR2Q86V24 386 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 TMEM139Q8IV31 216 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 KIRREL3Q8IZU9 778 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 NPEPL1Q8NDH3 523 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 FAM222BQ8WU58 562 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 PTPMT1Q8WUK0 201 aaPredicted RBP3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 FGF14Q92915 247 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 TCEAL3Q969E4 200 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 CASD1Q96PB1 797 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 HNRNPABQ99729 332 aaKnown RBP3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 DCTN5Q9BTE1 182 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 API5Q9BZZ5 524 aaKnown RBP3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 UBA5Q9GZZ9 404 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 FAM49AQ9H0Q0 323 aaPredicted RBP3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 ZBP1Q9H171 429 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 ATP13A3Q9H7F0 1226 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 PXMP2Q9NR77 195 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 ERAP1Q9NZ08 941 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 B3GAT1Q9P2W7 334 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 EPHA6Q9UF33 1036 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 GMEB2Q9UKD1 530 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 PTRH2Q9Y3E5 179 aaKnown RBP3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 MGAQ8IWI9 3026 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 NRCAMQ92823 1304 aa3.93□□□□□ -1.78
SMARCC1-207ENST00000485833 UBR5O95071 2799 aaPredicted RBP3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 PLXNB3Q9ULL4 1909 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 LOC100509620A0A075B734 347 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 LOC102723996A0A087X1L8 192 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 MBLAC1A4D2B0 266 aaPredicted RBP3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 ADAMDEC1O15204 470 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 DUS4LO95620 317 aaKnown RBP3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 CLDN1O95832 211 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 PDHBP11177 359 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 NOVP48745 357 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 SLC9A3P48764 834 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 GEMIN4P57678 1058 aaKnown RBP3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 GSDMDP57764 484 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 STARD6P59095 220 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 IRX6P78412 446 aaPredicted RBP3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 SMC1AQ14683 1233 aaKnown RBP3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 STXBP2Q15833 593 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 CDC37Q16543 378 aaPredicted RBP3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 C15orf59Q2T9L4 293 aaPredicted RBP3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 LETM2Q2VYF4 491 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 PHLDA2Q53GA4 152 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 CLLU1OSQ5K130 101 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 ZNF444Q8N0Y2 327 aaPredicted RBP3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 SLC39A11Q8N1S5 342 aa3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 GUF1Q8N442 669 aaKnown RBP3.92□□□□□ -1.78
SMARCC1-207ENST00000485833 MCUQ8NE86 351 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms