RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 SSUH2Q9Y2M2 353 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 RAXQ9Y2V3 346 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 TRAF6Q9Y4K3 522 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 PCDHGA6Q9Y5G7 932 aa18.87■□□□□ 0.61
COL6A2-208ENST00000485591 APC2O95996 2303 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 CCDC88CQ9P219 2028 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 IGLV3-12A0A075B6K2 115 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 A0A0G2JN53 185 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 ZNF860A6NHJ4 632 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 TAF4O00268 1085 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 PLPP1O14494 284 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 KLK10O43240 276 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 SCELO95171 688 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 CD63P08962 238 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 LIFP15018 202 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 SERPINB3P29508 390 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 MTTPP55157 894 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 BTN3A2P78410 334 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 VASH2Q86V25 355 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 SPACA3Q8IXA5 215 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 KIRREL3Q8IZU9 778 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 SERINC2Q96SA4 455 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 SORT1Q99523 831 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 EFHD1Q9BUP0 239 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 ACPTQ9BZG2 426 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 ZNF395Q9H8N7 513 aaPredicted RBP18.86■□□□□ 0.61
COL6A2-208ENST00000485591 WDR54Q9H977 334 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 COPS7BQ9H9Q2 264 aaPredicted RBP18.86■□□□□ 0.61
COL6A2-208ENST00000485591 NMRK1Q9NWW6 199 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 CTSFQ9UBX1 484 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 ZNF282Q9UDV7 671 aaPredicted RBP18.86■□□□□ 0.61
COL6A2-208ENST00000485591 ZDHHC2Q9UIJ5 367 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 HAO1Q9UJM8 370 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 KCND3Q9UK17 655 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 SLC12A4Q9UP95 1085 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.86■□□□□ 0.61
COL6A2-208ENST00000485591 RAP2CQ9Y3L5 183 aa18.86■□□□□ 0.61
COL6A2-208ENST00000485591 TMEM233B4DJY2 109 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 SAP18O00422 153 aaKnown RBP18.85■□□□□ 0.61
COL6A2-208ENST00000485591 SNNO75324 88 aaPredicted RBP18.85■□□□□ 0.61
COL6A2-208ENST00000485591 CHEK2O96017 543 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 F8A1P23610 371 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 SSR2P43308 183 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 RPS15P62841 145 aaKnown RBP18.85■□□□□ 0.61
COL6A2-208ENST00000485591 MAT1AQ00266 395 aaKnown RBP18.85■□□□□ 0.61
COL6A2-208ENST00000485591 MLIPQ5VWP3 458 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 TRIM46Q7Z4K8 759 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 ARFGAP2Q8N6H7 521 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 ENDOVQ8N8Q3 282 aaKnown RBP18.85■□□□□ 0.61
COL6A2-208ENST00000485591 AGR3Q8TD06 166 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 DYDC1Q8WWB3 177 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 DCBLD2Q96PD2 775 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 NPLQ9BXD5 320 aaPredicted RBP18.85■□□□□ 0.61
COL6A2-208ENST00000485591 ZNF717Q9BY31 904 aaPredicted RBP18.85■□□□□ 0.61
COL6A2-208ENST00000485591 ILKAPQ9H0C8 392 aaPredicted RBP18.85■□□□□ 0.61
COL6A2-208ENST00000485591 MKKSQ9NPJ1 570 aaPredicted RBP18.85■□□□□ 0.61
COL6A2-208ENST00000485591 THAP1Q9NVV9 213 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 HCN3Q9P1Z3 774 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 TRPC4Q9UBN4 977 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 NXT1Q9UKK6 140 aaKnown RBP18.85■□□□□ 0.61
COL6A2-208ENST00000485591 PADI2Q9Y2J8 665 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 FIS1Q9Y3D6 152 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 DNAJC15Q9Y5T4 150 aa18.85■□□□□ 0.61
COL6A2-208ENST00000485591 ACACAQ13085 2346 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 A0A087WV48 116 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 VSTM2BA6NLU5 285 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 RTCAO00442 366 aaKnown RBP18.84■□□□□ 0.61
COL6A2-208ENST00000485591 B3GALT2O43825 422 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 CNOT3O75175 753 aaKnown RBP18.84■□□□□ 0.61
COL6A2-208ENST00000485591 ATXN8OSP0DMR3 200 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 HIST1H1TP22492 207 aaPredicted RBP18.84■□□□□ 0.61
COL6A2-208ENST00000485591 ATP5A1P25705 553 aaKnown RBP18.84■□□□□ 0.61
COL6A2-208ENST00000485591 CERS1P27544 350 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 PTPN4P29074 926 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 NKG7Q16617 165 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 SYT16Q17RD7 645 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 AP5B1Q2VPB7 878 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 UGT3A2Q3SY77 523 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 OR4C11Q6IEV9 310 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 SCIMPQ6UWF3 145 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 ZNF793Q6ZN11 406 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 LRRC69Q6ZNQ3 347 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 NUDT13Q86X67 352 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 ZNF781Q8N8C0 355 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 OR5T3Q8NGG3 340 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 OR51Q1Q8NH59 317 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 TWIST2Q8WVJ9 160 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 ZNF75CPQ92670 426 aaPredicted RBP18.84■□□□□ 0.61
COL6A2-208ENST00000485591 CCNL2Q96S94 520 aaPredicted RBP18.84■□□□□ 0.61
COL6A2-208ENST00000485591 TGIF2Q9GZN2 237 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 C14orf105Q9NVL8 296 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 WDR70Q9NW82 654 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 AHSPQ9NZD4 102 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 VPS29Q9UBQ0 182 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 FARSAQ9Y285 508 aaKnown RBP18.84■□□□□ 0.61
COL6A2-208ENST00000485591 ASPMQ8IZT6 3477 aa18.84■□□□□ 0.61
COL6A2-208ENST00000485591 KLF7O75840 302 aaPredicted RBP18.83■□□□□ 0.6
COL6A2-208ENST00000485591 BSGP35613 385 aa18.83■□□□□ 0.6
COL6A2-208ENST00000485591 OLR1P78380 273 aa18.83■□□□□ 0.6
COL6A2-208ENST00000485591 OCA2Q04671 838 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms