RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 KLHL7Q8IXQ5 586 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 APCDD1LQ8NCL9 501 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 ARMC2Q8NEN0 867 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 ANKRD49Q8WVL7 239 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 TMEM125Q96AQ2 219 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 PDLIM2Q96JY6 352 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 GPAMQ9HCL2 828 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 FBN2P35556 2912 aa17.97■□□□□ 0.47
COL27A1-205ENST00000485397 FAM95CA0A1B0GW59 222 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 FCHO1O14526 889 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 ADAM10O14672 748 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 MYO1DO94832 1006 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 CLCN2P51788 898 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 MGAT5Q09328 741 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 TSNQ15631 228 aaKnown RBP17.96■□□□□ 0.47
COL27A1-205ENST00000485397 SULF2Q8IWU5 870 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.96■□□□□ 0.473e-6■■□□□ 12.7
COL27A1-205ENST00000485397 ARMC10Q8N2F6 343 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 NKAPQ8N5F7 415 aaKnown RBP17.96■□□□□ 0.47
COL27A1-205ENST00000485397 B3GNT7Q8NFL0 401 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 LRRC39Q96DD0 335 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 DMRTA2Q96SC8 542 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 PNO1Q9NRX1 252 aaKnown RBP17.96■□□□□ 0.47
COL27A1-205ENST00000485397 TRMT1Q9NXH9 659 aaKnown RBP17.96■□□□□ 0.47
COL27A1-205ENST00000485397 ZNF223Q9UK11 482 aaPredicted RBP17.96■□□□□ 0.47
COL27A1-205ENST00000485397 FBXW2Q9UKT8 454 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 MMACHCQ9Y4U1 282 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 OARD1Q9Y530 152 aa17.96■□□□□ 0.47
COL27A1-205ENST00000485397 E9PLN8 166 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 TGFBR3LH3BV60 316 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 PRRG2O14669 202 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 WDR47O94967 919 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 C1GALT1C1LP0DN25 315 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 PPP2R1BP30154 601 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 HNRNPFP52597 415 aaKnown RBP17.95■□□□□ 0.46
COL27A1-205ENST00000485397 ARL4CP56559 192 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 CDKL1Q00532 357 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 FRG1Q14331 258 aaKnown RBP17.95■□□□□ 0.46
COL27A1-205ENST00000485397 SLCO4C1Q6ZQN7 724 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 CEP97Q8IW35 865 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 SCUBE1Q8IWY4 988 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 TMEM52Q8NDY8 209 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 PHF10Q8WUB8 498 aaKnown RBP17.95■□□□□ 0.46
COL27A1-205ENST00000485397 CCT6BQ92526 530 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 ANKRD7Q92527 254 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 GAL3ST3Q96A11 431 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 CAPZA3Q96KX2 299 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 VKORC1Q9BQB6 163 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 PRTFDC1Q9NRG1 225 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 CTNNAL1Q9UBT7 734 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 KLF13Q9Y2Y9 288 aaPredicted RBP17.95■□□□□ 0.46
COL27A1-205ENST00000485397 CLDN16Q9Y5I7 305 aa17.95■□□□□ 0.46
COL27A1-205ENST00000485397 TEP1Q99973 2627 aaKnown RBP17.95■□□□□ 0.46
COL27A1-205ENST00000485397 CACNA1CQ13936 2221 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 A0A1B0GTH9 108 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 TFECO14948 347 aaPredicted RBP17.94■□□□□ 0.46
COL27A1-205ENST00000485397 PEX1O43933 1283 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 H2AFYO75367 372 aaKnown RBP17.94■□□□□ 0.46
COL27A1-205ENST00000485397 ITGA10O75578 1167 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 HNRNPH1P31943 449 aaKnown RBP17.94■□□□□ 0.46
COL27A1-205ENST00000485397 SLC6A12P48065 614 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 HNMTP50135 292 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 STXBP1P61764 594 aaKnown RBP17.94■□□□□ 0.46
COL27A1-205ENST00000485397 SLBPQ14493 270 aaKnown RBP eCLIP17.94■□□□□ 0.46
COL27A1-205ENST00000485397 FASTKD3Q14CZ7 662 aaKnown RBP17.94■□□□□ 0.46
COL27A1-205ENST00000485397 FRA10AC1Q70Z53 315 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 MDGA2Q7Z553 956 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 CYP4Z2PQ8N1L4 340 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 TMEM156Q8N614 296 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 POGLUT1Q8NBL1 392 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 FBXO36Q8NEA4 188 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 NCLNQ969V3 563 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 RHBDF1Q96CC6 855 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 MS4A6EQ96DS6 147 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 FAR2Q96K12 515 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 TRIM31Q9BZY9 425 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 MOCS1Q9NZB8 636 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 PPT2Q9UMR5 302 aa17.94■□□□□ 0.46
COL27A1-205ENST00000485397 PDZD2O15018 2839 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 LRIT2A6NDA9 550 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 NCF1BA6NI72 391 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-205ENST00000485397 NCF1CA8MVU1 366 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-205ENST00000485397 KLRC4-KLRK1H3BQV0 150 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 ZSCAN12O43309 604 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 ERI3O43414 337 aaKnown RBP17.93■□□□□ 0.46
COL27A1-205ENST00000485397 HS6ST1O60243 411 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 PRKNO60260 465 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-205ENST00000485397 NCF1P14598 390 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-205ENST00000485397 TCP1P17987 556 aaKnown RBP17.93■□□□□ 0.46
COL27A1-205ENST00000485397 GNAZP19086 355 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 PTGS2P35354 604 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 GPR143P51810 404 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 RAB38P57729 211 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 KRTAP10-9P60411 292 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 GPR85P60893 370 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 DR1Q01658 176 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 PDIA2Q13087 525 aaKnown RBP17.93■□□□□ 0.46
COL27A1-205ENST00000485397 TMIGD1Q6UXZ0 262 aa17.93■□□□□ 0.46
COL27A1-205ENST00000485397 C16orf47Q6ZP98 133 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-205ENST00000485397 SYDE1Q6ZW31 735 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms