RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CLCQ05315 142 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 TUBB8Q3ZCM7 444 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 KHDRBS2Q5VWX1 349 aaKnown RBP16.78■□□□□ 0.28
SREBF1-213ENST00000485080 CPZQ66K79 652 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 UBE3DQ7Z6J8 389 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 C4orf33Q8N1A6 199 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 OR5T3Q8NGG3 340 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 F2RL3Q96RI0 385 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 SERINC2Q96SA4 455 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 ZNF382Q96SR6 550 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 TRIM55Q9BYV6 548 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 VN1R1Q9GZP7 353 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 DMRT3Q9NQL9 472 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 PRDM7Q9NQW5 492 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 ACSS2Q9NR19 701 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 MID2Q9UJV3 735 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 RALYQ9UKM9 306 aaKnown RBP16.78■□□□□ 0.28
SREBF1-213ENST00000485080 MKL2Q9ULH7 1088 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 STK38LQ9Y2H1 464 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 PLLPQ9Y342 182 aa16.78■□□□□ 0.28
SREBF1-213ENST00000485080 ZNF462Q96JM2 2506 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 ZNF860A6NHJ4 632 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 ALOX12BO75342 701 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 ERLIN1O75477 346 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 MLYCDO95822 493 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 B3GALT4O96024 378 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 MYL2P10916 166 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 PCNAP12004 261 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 ACPPP15309 386 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 JAK1P23458 1154 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 EFNA3P52797 238 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 MTTPP55157 894 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 BTN3A2P78410 334 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 PHEXP78562 749 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 RHAGQ02094 409 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 AIMP2Q13155 320 aaKnown RBP16.77■□□□□ 0.28
SREBF1-213ENST00000485080 CUL3Q13618 768 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 LY6DQ14210 128 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 ZRSR2Q15696 482 aaKnown RBP16.77■□□□□ 0.28
SREBF1-213ENST00000485080 CPSF6Q16630 551 aaKnown RBP eCLIP16.77■□□□□ 0.28
SREBF1-213ENST00000485080 TNFAIP8L3Q5GJ75 292 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 FRG2Q64ET8 278 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 TCTN3Q6NUS6 607 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 MILR1Q7Z6M3 343 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 MYLK4Q86YV6 388 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-213ENST00000485080 PRSS58Q8IYP2 241 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 CLEC1AQ8NC01 280 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 ADAMTS18Q8TE60 1221 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 PPP4R1Q8TF05 950 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 ABHD17AQ96GS6 310 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 APOPT1Q96IL0 206 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 FRG2BQ96QU4 278 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 SLC25A18Q9H1K4 315 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 SEMA4BQ9NPR2 832 aaPredicted RBP16.77■□□□□ 0.28
SREBF1-213ENST00000485080 ATP13A2Q9NQ11 1180 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 ZNF225Q9UK10 706 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 FBXL4Q9UKA2 621 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 PCDHGB7Q9Y5F8 929 aa16.77■□□□□ 0.28
SREBF1-213ENST00000485080 DOCK10Q96BY6 2186 aa16.77■□□□□ 0.27
SREBF1-213ENST00000485080 MAGEB17A8MXT2 336 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 H3BQF6 201 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 B3GALT2O43825 422 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 KLHL41O60662 606 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 DNAJB6O75190 326 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 JRKO75564 520 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 SUPT7LO94864 414 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 HPP00738 406 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 C8orf89P0DMQ9 161 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 CPA3P15088 417 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 PLA2G16P53816 162 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 CDH13P55290 713 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 LCP2Q13094 533 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 BEND6Q5SZJ8 279 aaPredicted RBP16.76■□□□□ 0.27
SREBF1-213ENST00000485080 LETMD1Q6P1Q0 360 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 LRIG3Q6UXM1 1119 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 QSOX2Q6ZRP7 698 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 NDUFAF7Q7L592 441 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 SHISA5Q8N114 240 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 CA13Q8N1Q1 262 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 OR4F6Q8NGB9 312 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 PEX11GQ96HA9 241 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 CDK15Q96Q40 435 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 CENPKQ9BS16 269 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 SEMA4CQ9C0C4 833 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 ZNF700Q9H0M5 742 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 LYRM4Q9HD34 91 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 OXSMQ9NWU1 459 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 TRPS1Q9UHF7 1281 aa16.76■□□□□ 0.27
SREBF1-213ENST00000485080 A0A1B0GTL3 188 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 PPP6CO00743 305 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 DNAJB5O75953 348 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 SEMA3DO95025 777 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 TGFB1P01137 390 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 COX6A1P12074 109 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 HIST1H1TP22492 207 aaPredicted RBP16.75■□□□□ 0.27
SREBF1-213ENST00000485080 ATP5A1P25705 553 aaKnown RBP16.75■□□□□ 0.27
SREBF1-213ENST00000485080 PKNOX1P55347 436 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 OLR1P78380 273 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 CHAF1BQ13112 559 aa16.75■□□□□ 0.27
SREBF1-213ENST00000485080 RUNX2Q13950 521 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms