RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 EGFL8Q99944 293 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 DEFB126Q9BYW3 111 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 DERL2Q9GZP9 239 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 EHD1Q9H4M9 534 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 NPIPA1Q9UND3 350 aa10.72□□□□□ -0.69
SCFD1-206ENST00000484733 NOTCH2Q04721 2471 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 CLEC3AO75596 197 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 MAOAP21397 527 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 GGT5P36269 586 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 HSD17B7P56937 341 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 PDIA2Q13087 525 aaKnown RBP10.71□□□□□ -0.69
SCFD1-206ENST00000484733 MAPKAPK3Q16644 382 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 ADPRMQ3LIE5 342 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 KRT78Q8N1N4 520 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 APCDD1LQ8NCL9 501 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 B3GNT7Q8NFL0 401 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 ANKRD49Q8WVL7 239 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 TMEM125Q96AQ2 219 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 TRIM51Q9BSJ1 452 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 KCNF1Q9H3M0 494 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 TRMT1Q9NXH9 659 aaKnown RBP10.71□□□□□ -0.69
SCFD1-206ENST00000484733 RNF14Q9UBS8 474 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 TINAGQ9UJW2 476 aa10.71□□□□□ -0.69
SCFD1-206ENST00000484733 KLF13Q9Y2Y9 288 aaPredicted RBP10.71□□□□□ -0.69
SCFD1-206ENST00000484733 CELSR2Q9HCU4 2923 aa10.71□□□□□ -0.7
SCFD1-206ENST00000484733 LRIT2A6NDA9 550 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 WDR47O94967 919 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 HPDP32754 393 aaPredicted RBP10.7□□□□□ -0.7
SCFD1-206ENST00000484733 HNF4AP41235 474 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 CLCN2P51788 898 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 RAB38P57729 211 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 BTN3A2P78410 334 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 POU4F1Q01851 419 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 RUNX2Q13950 521 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 TSNQ15631 228 aaKnown RBP10.7□□□□□ -0.7
SCFD1-206ENST00000484733 TMIGD1Q6UXZ0 262 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 CYS1Q717R9 158 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 CEP97Q8IW35 865 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.7□□□□□ -0.7
SCFD1-206ENST00000484733 EID3Q8N140 333 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 BBOF1Q8ND07 529 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 MS4A6EQ96DS6 147 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 WDR34Q96EX3 536 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 FAR2Q96K12 515 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 GPAMQ9HCL2 828 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 SH3BGRL2Q9UJC5 107 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 SAR1BQ9Y6B6 198 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 A0A088AWK7 358 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 CLDN14O95500 239 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 COX6B1P14854 86 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 ZNF10P21506 573 aaPredicted RBP10.7□□□□□ -0.7
SCFD1-206ENST00000484733 SAT1P21673 171 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 ELAVL4P26378 380 aaKnown RBP10.7□□□□□ -0.7
SCFD1-206ENST00000484733 ST13P50502 369 aaKnown RBP10.7□□□□□ -0.7
SCFD1-206ENST00000484733 GPR143P51810 404 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 ZNF460Q14592 562 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 RNFT1Q5M7Z0 435 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 FRA10AC1Q70Z53 315 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 GDF7Q7Z4P5 450 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 GPALPP1Q8IXQ4 340 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 ZNF595Q8IYB9 648 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 C16orf52Q8NHV5 167 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 MTFMTQ96DP5 389 aaKnown RBP10.7□□□□□ -0.7
SCFD1-206ENST00000484733 VMP1Q96GC9 406 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 CAPZA3Q96KX2 299 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 DMRTA2Q96SC8 542 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 RHBGQ9H310 441 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 PRTFDC1Q9NRG1 225 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 ASB1Q9Y576 335 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 CLDN16Q9Y5I7 305 aa10.7□□□□□ -0.7
SCFD1-206ENST00000484733 EFCAB8A8MWE9 144 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 E9PLN8 166 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 KLRC4-KLRK1H3BQV0 150 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 CLDN4O14493 209 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 EIF3HO15372 352 aaKnown RBP eCLIP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 ABOP16442 354 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 ZNF24P17028 368 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 TFEBP19484 476 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 HNRNPH1P31943 449 aaKnown RBP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 SLBPQ14493 270 aaKnown RBP eCLIP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 FASTKD3Q14CZ7 662 aaKnown RBP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 TGFBIQ15582 683 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 FGD2Q7Z6J4 655 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 DOLPP1Q86YN1 238 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 TSPAN17Q96FV3 270 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 PDLIM2Q96JY6 352 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 SERINC2Q96SA4 455 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 NAPGQ99747 312 aaPredicted RBP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 VKORC1Q9BQB6 163 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 TSPAN10Q9H1Z9 355 aaPredicted RBP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 CNOT10Q9H9A5 744 aaKnown RBP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 SMYD2Q9NRG4 433 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 ZNF223Q9UK11 482 aaPredicted RBP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 TRBV11-1A0A0K0K1C0 115 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 A8MUA0 341 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 CLGNO14967 610 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 TAPBPO15533 448 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 B3GALT2O43825 422 aa10.69□□□□□ -0.7
SCFD1-206ENST00000484733 TBX6O95947 436 aaPredicted RBP10.69□□□□□ -0.7
SCFD1-206ENST00000484733 GDF5P43026 501 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms