RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 SLC13A3Q8WWT9 602 aa16.61■□□□□ 0.25
DDR1-245ENST00000484556 NCLNQ969V3 563 aa16.61■□□□□ 0.25
DDR1-245ENST00000484556 ANP32EQ9BTT0 268 aa16.61■□□□□ 0.25
DDR1-245ENST00000484556 UBTD1Q9HAC8 227 aa16.61■□□□□ 0.25
DDR1-245ENST00000484556 TMEM184CQ9NVA4 438 aa16.61■□□□□ 0.25
DDR1-245ENST00000484556 SLC22A7Q9Y694 548 aa16.61■□□□□ 0.25
DDR1-245ENST00000484556 ZNF839A8K0R7 811 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 LCMT2O60294 686 aaKnown RBP16.6■□□□□ 0.25
DDR1-245ENST00000484556 HCN1O60741 890 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 GALR3O60755 368 aaPredicted RBP16.6■□□□□ 0.25
DDR1-245ENST00000484556 TTPAP49638 278 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 GBX1Q14549 363 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 KCNJ11Q14654 390 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 ASTE1Q2TB18 679 aaPredicted RBP16.6■□□□□ 0.25
DDR1-245ENST00000484556 ACSF3Q4G176 576 aaPredicted RBP16.6■□□□□ 0.25
DDR1-245ENST00000484556 ACSBG2Q5FVE4 666 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 SPNS2Q8IVW8 549 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 LRRC56Q8IYG6 542 aaPredicted RBP16.6■□□□□ 0.25
DDR1-245ENST00000484556 KRT35Q92764 455 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 VMP1Q96GC9 406 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 SCYL1Q96KG9 808 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 CCDC77Q9BR77 488 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 AARSD1Q9BTE6 412 aaKnown RBP16.6■□□□□ 0.25
DDR1-245ENST00000484556 SLC6A15Q9H2J7 730 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 FAM114A2Q9NRY5 505 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 GALPQ9UBC7 116 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDR1-245ENST00000484556 NPFFR2Q9Y5X5 522 aa16.6■□□□□ 0.25
DDR1-245ENST00000484556 DSCAMO60469 2012 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 SH3D21A4FU49 640 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 WWP2O00308 870 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 CATP04040 527 aaKnown RBP16.59■□□□□ 0.25
DDR1-245ENST00000484556 SLC35G6P0C7Q6 338 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 HSD17B2P37059 387 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 MEF2AQ02078 507 aaPredicted RBP16.59■□□□□ 0.25
DDR1-245ENST00000484556 HERC3Q15034 1050 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 KLHL38Q2WGJ6 581 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 CAPN13Q6MZZ7 669 aaPredicted RBP16.59■□□□□ 0.25
DDR1-245ENST00000484556 AFAP1L2Q8N4X5 818 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 THAP11Q96EK4 314 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 PDLIM2Q96JY6 352 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 DACH2Q96NX9 599 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 RASL10BQ96S79 203 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 WDR83Q9BRX9 315 aaKnown RBP16.59■□□□□ 0.25
DDR1-245ENST00000484556 RHBGQ9H310 441 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 PRDM9Q9NQV7 894 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 PNO1Q9NRX1 252 aaKnown RBP16.59■□□□□ 0.25
DDR1-245ENST00000484556 SPTLC3Q9NUV7 552 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 C6orf203Q9P0P8 240 aaPredicted RBP16.59■□□□□ 0.25
DDR1-245ENST00000484556 SAMD15Q9P1V8 674 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 ADGRE2Q9UHX3 823 aa16.59■□□□□ 0.25
DDR1-245ENST00000484556 EIF3LQ9Y262 564 aaKnown RBP16.59■□□□□ 0.25
DDR1-245ENST00000484556 CD3EAPO15446 510 aaKnown RBP16.58■□□□□ 0.24
DDR1-245ENST00000484556 PJA2O43164 708 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 ZFAND5O76080 213 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 EPPINO95925 133 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 IL2RAP01589 272 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 CCL3P10147 92 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 ATP5DP30049 168 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 PPP2R1BP30154 601 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 TRPC1P48995 793 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 NR1H2P55055 460 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 HYAL4Q2M3T9 481 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 KIAA0930Q6ICG6 404 aaPredicted RBP16.58■□□□□ 0.24
DDR1-245ENST00000484556 RTL4Q6ZR62 310 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 FAM71DQ8N9W8 422 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 DNAJC7Q99615 494 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 ZFATQ9P243 1243 aa16.58■□□□□ 0.24
DDR1-245ENST00000484556 NDUFS4O43181 175 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 AKR1B10O60218 316 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 NDUFS3O75489 264 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 RFPL3SP0C7P2 107 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 ALOX12P18054 663 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 RPS3P23396 243 aaKnown RBP eCLIP16.57■□□□□ 0.24
DDR1-245ENST00000484556 IMPA1P29218 277 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 FMO4P31512 558 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 PTH2RP49190 550 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 CDH17Q12864 832 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 SIX1Q15475 284 aaPredicted RBP16.57■□□□□ 0.24
DDR1-245ENST00000484556 ACKR1Q16570 336 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 KRTAP24-1Q3LI83 254 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 HECTD2Q5U5R9 776 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 HEPHL1Q6MZM0 1159 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 ABHD13Q7L211 337 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 LACC1Q8IV20 430 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 OR8K1Q8NGG5 319 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 CHP1Q99653 195 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 ZNF703Q9H7S9 590 aaPredicted RBP16.57■□□□□ 0.24
DDR1-245ENST00000484556 SACM1LQ9NTJ5 587 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 RIMKLBQ9ULI2 386 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 ATG4BQ9Y4P1 393 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 FREM3P0C091 2139 aa16.57■□□□□ 0.24
DDR1-245ENST00000484556 RAI1Q7Z5J4 1906 aaPredicted RBP16.57■□□□□ 0.24
DDR1-245ENST00000484556 CASKO14936 926 aa16.56■□□□□ 0.24
DDR1-245ENST00000484556 SIAH2O43255 324 aa16.56■□□□□ 0.24
DDR1-245ENST00000484556 ZNF888P0CJ79 500 aaPredicted RBP16.56■□□□□ 0.24
DDR1-245ENST00000484556 ADRA1DP25100 572 aa16.56■□□□□ 0.24
DDR1-245ENST00000484556 TIMP3P35625 211 aa16.56■□□□□ 0.24
DDR1-245ENST00000484556 PIGAP37287 484 aa16.56■□□□□ 0.24
DDR1-245ENST00000484556 GRIA1P42261 906 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms