RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 L3MBTL1Q9Y468 752 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 POLR3HQ9Y535 204 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 PCDHGA11Q9Y5H2 935 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 KALRNO60229 2985 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 FAM208BQ5VWN6 2430 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 A0A087WV48 116 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 KIR2DS5A0A0G2JLQ3 304 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 A0A0G2JNG1 304 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 SERTM1A2A2V5 107 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 ANKRD33BA6NCL7 494 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 KIR2DS3K7RE56 304 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 FBP2O00757 339 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 CAPN5O15484 640 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 EEDO75530 441 aaKnown RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 UBXN7O94888 489 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 TIAF1O95411 115 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 SLC16A8O95907 504 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 PDYNP01213 254 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 PRB1P04280 392 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 IL6P05231 212 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 G6PDP11413 515 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 MTHFD1P11586 935 aaKnown RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 HSD3B1P14060 373 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 JAK1P23458 1154 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 PRPH2P23942 346 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 HSD3B2P26439 372 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 IMPA1P29218 277 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 VHLP40337 213 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 CASP2P42575 452 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 CLNS1AP54105 237 aaKnown RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 SESN3P58005 492 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 UFM1P61960 85 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 CYP4F2P78329 520 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 HMGCS1Q01581 520 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 DMPKQ09013 629 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 TRAP1Q12931 704 aaKnown RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 LAPTM5Q13571 262 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 TSTA3Q13630 321 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 KIR2DS5Q14953 304 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 PLCL1Q15111 1095 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 MUM1Q2TAK8 710 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 ZNF658BQ4V348 819 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 RFTN2Q52LD8 501 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 THEMIS2Q5TEJ8 643 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 ARHGAP40Q5TG30 622 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 KIAA1614Q5VZ46 1190 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 GRHL2Q6ISB3 625 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 ZFP1Q6P2D0 407 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 TMEM71Q6P5X7 295 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 CYP20A1Q6UW02 462 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 ABRAXAS1Q6UWZ7 409 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 PDZD3Q86UT5 571 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 CACTIN-AS1Q8N1I8 211 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 HIPK4Q8NE63 616 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 OR4D9Q8NGE8 314 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 WDR48Q8TAF3 677 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 HMGCLL1Q8TB92 370 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 STARD8Q92502 1023 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 TFGQ92734 400 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 UBE2E3Q969T4 207 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 MTFMTQ96DP5 389 aaKnown RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 ASB9Q96DX5 294 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 RSRC1Q96IZ7 334 aaKnown RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 LRGUKQ96M69 825 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 HBEGFQ99075 208 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 EFCAB11Q9BUY7 163 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 TRIM15Q9C019 465 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 STRADBQ9C0K7 418 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 PCBD2Q9H0N5 130 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 S100A14Q9HCY8 104 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 CCDC177Q9NQR7 707 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 THSD1Q9NS62 852 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 POT1Q9NUX5 634 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 ASIC5Q9NY37 505 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 NKX1-2Q9UD57 310 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-216ENST00000484087 MAPRE3Q9UPY8 281 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 AP3M1Q9Y2T2 418 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 PCDHGA8Q9Y5G5 932 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 PCDHGA7Q9Y5G6 932 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 B3GALT1Q9Y5Z6 326 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 ATRXP46100 2492 aa6.63□□□□□ -1.35
BRCA1-216ENST00000484087 SPTBP11277 2137 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 KCNE1BA0A087WTH5 132 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 LILRA5A6NI73 299 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 E7ENX8 843 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 E7EQ34 232 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 NPIPB8E9PQR5 432 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 H0YIV9 168 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 EFSO43281 561 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 DNAJA2O60884 412 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 BCAS2O75934 225 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-216ENST00000484087 ANPEPP15144 967 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 ACPPP15309 386 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 ZNF28P17035 718 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 AMD1P17707 334 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 XRCC1P18887 633 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-216ENST00000484087 EPORP19235 508 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 CAPN3P20807 821 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 CXCR2P25025 360 aa6.62□□□□□ -1.35
BRCA1-216ENST00000484087 VARSP26640 1264 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms