RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 ARFIP2P53365 341 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 EMP3P54852 163 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 HERC3Q15034 1050 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 TGIF1Q15583 401 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 IMPG1Q17R60 797 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 GKAP1Q5VSY0 366 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 KHDRBS2Q5VWX1 349 aaKnown RBP18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 EPGNQ6UW88 154 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 ESX1Q8N693 406 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 PROKR1Q8TCW9 393 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 GAL3ST3Q96A11 431 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 COL26A1Q96A83 441 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 GBP5Q96PP8 586 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 CENPKQ9BS16 269 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 YIPF2Q9BWQ6 316 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 SPRY4Q9C004 299 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 WDR55Q9H6Y2 383 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 SLC22A7Q9Y694 548 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 RTCAO00442 366 aaKnown RBP18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 SDHDO14521 159 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 FOXS1O43638 330 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 KLHL18O94889 574 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 PTX3P26022 381 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 IDH3AP50213 366 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 PCBP4P57723 403 aaKnown RBP18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 BTN3A2P78410 334 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 DCDP81605 110 aaKnown RBP18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 FAM53BQ14153 422 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 XKR7Q5GH72 579 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 C10orf62Q5T681 223 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 ARHGAP40Q5TG30 622 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 LCN10Q6JVE6 187 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 PDSS2Q86YH6 399 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 CACNA2D3Q8IZS8 1091 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 IL22RA1Q8N6P7 574 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 OR2L5Q8NG80 312 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 OR2T11Q8NH01 316 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 FGF11Q92914 225 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 C3orf30Q96M34 536 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 LRFN5Q96NI6 719 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 COPS7BQ9H9Q2 264 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 LHX9Q9NQ69 397 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 GIMAP2Q9UG22 337 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 PADI1Q9ULC6 663 aa18.9■□□□□ 0.62
TRAPPC12-220ENST00000482645 RDH16O75452 317 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 LIPCP11150 499 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 ITGAXP20702 1163 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 OLR1P78380 273 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 HMGCS1Q01581 520 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 TGM3Q08188 693 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 CSTF3Q12996 717 aaKnown RBP18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 ADPRMQ3LIE5 342 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 NKAIN1Q4KMZ8 207 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 TMEM35AQ53FP2 167 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 DEPDC1Q5TB30 811 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 NXNQ6DKJ4 435 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 PRMT9Q6P2P2 845 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 ACAD11Q709F0 780 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 PIGWQ7Z7B1 504 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 OR52B2Q96RD2 323 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 SERPINI1Q99574 410 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 SORBS1Q9BX66 1292 aaKnown RBP18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 ACPTQ9BZG2 426 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 CHST8Q9H2A9 424 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 ZNF304Q9HCX3 659 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 PFDN4Q9NQP4 134 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 HCN3Q9P1Z3 774 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 IFT80Q9P2H3 777 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 ACSL6Q9UKU0 697 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 CDC14AQ9UNH5 594 aa18.89■□□□□ 0.61
TRAPPC12-220ENST00000482645 RGS14O43566 566 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 TLX3O43711 291 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 NSA2O95478 260 aaKnown RBP18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 FBLP22087 321 aaKnown RBP18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 SSR2P43308 183 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 MAT1AQ00266 395 aaKnown RBP18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 NR6A1Q15406 480 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 SYT16Q17RD7 645 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 MLIPQ5VWP3 458 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 ZNF385CQ66K41 422 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 ABHD17CQ6PCB6 329 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 UNQ6494/PRO21346Q6UXR6 183 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 RNF165Q6ZSG1 346 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 HOMEZQ8IX15 550 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 RGMAQ96B86 450 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 TUBGCP3Q96CW5 907 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 MVB12AQ96EY5 273 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 RILPQ96NA2 401 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 KCNC2Q96PR1 638 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 TMEM121BQ9BXQ6 578 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 MRPL1Q9BYD6 325 aaKnown RBP18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 BRF2Q9HAW0 419 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 RIC8BQ9NVN3 520 aa18.88■□□□□ 0.61
TRAPPC12-220ENST00000482645 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC12-220ENST00000482645 SLC28A1O00337 649 aa18.87■□□□□ 0.61
TRAPPC12-220ENST00000482645 PLPP1O14494 284 aa18.87■□□□□ 0.61
TRAPPC12-220ENST00000482645 GALR3O60755 368 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC12-220ENST00000482645 TCN2P20062 427 aa18.87■□□□□ 0.61
TRAPPC12-220ENST00000482645 SKP1P63208 163 aa18.87■□□□□ 0.61
TRAPPC12-220ENST00000482645 CUL3Q13618 768 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms